RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ANKRD36A6QL64 1941 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 IGHV1OR15-9A0A0B4J2B8 117 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 PLK4O00444 970 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 GJB3O75712 270 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 CHRNA3P32297 505 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 PTPN7P35236 360 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 TPMTP51580 245 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 CCNHP51946 323 aaPredicted RBP16.29■□□□□ 0.2
USP39-205ENST00000442708 COPS2P61201 443 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 NHLH1Q02575 133 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 METTL3Q86U44 580 aaKnown RBP16.29■□□□□ 0.2
USP39-205ENST00000442708 PGBD5Q8N414 524 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 AADATQ8N5Z0 425 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
USP39-205ENST00000442708 CASKIN2Q8WXE0 1202 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 OR8D1Q8WZ84 308 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 EXOC2Q96KP1 924 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 NSMCE3Q96MG7 304 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 OLFM3Q96PB7 478 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 LGMNQ99538 433 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 CYP8B1Q9UNU6 501 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 WASF2Q9Y6W5 498 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 SPAG17Q6Q759 2223 aa16.29■□□□□ 0.2
USP39-205ENST00000442708 FRYLO94915 3013 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 THADAQ6YHU6 1953 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 TTC24A2A3L6 582 aaPredicted RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 ALOX15BO15296 676 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 INSIG1O15503 277 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 ZBTB24O43167 697 aaPredicted RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 RPP40O75818 363 aaKnown RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 GSRP00390 522 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 IL1BP01584 269 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 ZFXP17010 805 aaPredicted RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 SLC8A1P32418 973 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 DRD3P35462 400 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 NBL1P41271 181 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 RHOAP61586 193 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 TFDP2Q14188 446 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 USP39Q53GS9 565 aaKnown RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 TMCO4Q5TGY1 634 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 PLPP6Q8IY26 295 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 UBL4BQ8N7F7 174 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 OR2AP1Q8NGE2 309 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 GRIN3AQ8TCU5 1115 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 ARRDC3Q96B67 414 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 HAUS1Q96CS2 278 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 HDAC11Q96DB2 347 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 ZNF599Q96NL3 588 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 TSGA13Q96PP4 275 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 OSBPL8Q9BZF1 889 aa16.28■□□□□ 0.2
USP39-205ENST00000442708 PABPC3Q9H361 631 aaKnown RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 HECAQ9UBI9 543 aaPredicted RBP16.28■□□□□ 0.2
USP39-205ENST00000442708 TNRC6BQ9UPQ9 1833 aaKnown RBP16.27■□□□□ 0.2
USP39-205ENST00000442708 ZSCAN12O43309 604 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.2
USP39-205ENST00000442708 LEFTY1O75610 366 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 IGLV3-19P01714 112 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 DNTTP04053 509 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 CCNCP24863 283 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 ZBTB16Q05516 673 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 MYLK3Q32MK0 819 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 ARSIQ5FYB1 569 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 FAM124AQ86V42 546 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 KBTBD6Q86V97 674 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 LRRC49Q8IUZ0 686 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 TEX26Q8N6G2 289 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 TMIEQ8NEW7 156 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 MAML1Q92585 1016 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 ZDHHC6Q9H6R6 413 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 IL36AQ9UHA7 158 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 EVLQ9UI08 416 aaPredicted RBP16.27■□□□□ 0.2
USP39-205ENST00000442708 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.2
USP39-205ENST00000442708 A0A1W2PP55 124 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 KRIT1O00522 736 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 MATN3O15232 486 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 ZNF217O75362 1048 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 ADH1BP00325 375 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 ACADMP11310 421 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 MX2P20592 715 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 TGM2P21980 687 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 CNR2P34972 360 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 RECQLP46063 649 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 SNRPD1P62314 119 aaKnown RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 PPIDQ08752 370 aaKnown RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 RFTN1Q14699 578 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 RPS6KA1Q15418 735 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 LPAL2Q16609 132 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 ZC3H14Q6PJT7 736 aaKnown RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 RYBPQ8N488 228 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 CCNYQ8ND76 341 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms