RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 RYBPQ8N488 228 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-205ENST00000440514 LZTR1Q8N653 840 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 OR2AP1Q8NGE2 309 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 TPCN2Q8NHX9 752 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 PIGKQ92643 395 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 ISG20Q96AZ6 181 aaKnown RBP18.35■□□□□ 0.53
CPSF4-205ENST00000440514 ARRDC3Q96B67 414 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 FAF2Q96CS3 445 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 EXOC2Q96KP1 924 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 NEUROG2Q9H2A3 272 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 C6orf106Q9H6K1 298 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-205ENST00000440514 ZDHHC6Q9H6R6 413 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 LHX3Q9UBR4 397 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 RIF1Q5UIP0 2472 aaKnown RBP18.35■□□□□ 0.53
CPSF4-205ENST00000440514 RALGAPA1Q6GYQ0 2036 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 GSRP00390 522 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 TGM1P22735 817 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 KDELR1P24390 212 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 SERPINB6P35237 376 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 CNTN1Q12860 1018 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 SF3A2Q15428 464 aaKnown RBP18.34■□□□□ 0.53
CPSF4-205ENST00000440514 CYTH1Q15438 398 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 ARSIQ5FYB1 569 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 SPDYCQ5MJ68 293 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 LRRC38Q5VT99 294 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 FAM46CQ5VWP2 391 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 TCEAL6Q6IPX3 200 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 MAP7D3Q8IWC1 876 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 RHOT1Q8IXI2 618 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 PQLC3Q8N755 202 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 CASKIN2Q8WXE0 1202 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 TCEAL3Q969E4 200 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 ZNF419Q96HQ0 510 aaPredicted RBP18.34■□□□□ 0.53
CPSF4-205ENST00000440514 HEPHQ9BQS7 1158 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 SEMA4GQ9NTN9 838 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 HECAQ9UBI9 543 aaPredicted RBP18.34■□□□□ 0.53
CPSF4-205ENST00000440514 TRIM10Q9UDY6 481 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 IPO11Q9UI26 975 aaKnown RBP18.34■□□□□ 0.53
CPSF4-205ENST00000440514 FZD4Q9ULV1 537 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 ALG6Q9Y672 507 aa18.34■□□□□ 0.53
CPSF4-205ENST00000440514 FAM47DPA6NHR8 397 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 C3orf70A6NLC5 250 aaPredicted RBP18.33■□□□□ 0.52
CPSF4-205ENST00000440514 PATE3B3GLJ2 98 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 PJA2O43164 708 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 LEFTY1O75610 366 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 MAP3K6O95382 1288 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 PRNPP04156 253 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 MARCKSL1P49006 195 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 ADPRHP54922 357 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 SNRPD1P62314 119 aaKnown RBP18.33■□□□□ 0.52
CPSF4-205ENST00000440514 IL10RBQ08334 325 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 INO80DQ53TQ3 878 aaPredicted RBP18.33■□□□□ 0.52
CPSF4-205ENST00000440514 PLA2G2CQ5R387 149 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 AGBL4Q5VU57 503 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 DCAF12L1Q5VU92 463 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.33■□□□□ 0.52
CPSF4-205ENST00000440514 DAAM2Q86T65 1068 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 ATPAF2Q8N5M1 289 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 TMIEQ8NEW7 156 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 SNX19Q92543 992 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 RNF25Q96BH1 459 aaPredicted RBP18.33■□□□□ 0.52
CPSF4-205ENST00000440514 GDAP1L1Q96MZ0 367 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 TMEM74BQ9NUR3 256 aa18.33■□□□□ 0.52
CPSF4-205ENST00000440514 BTNL10A8MVZ5 291 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 KRIT1O00522 736 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 PSTPIP1O43586 416 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 LRP3O75074 770 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 IGSF6O95976 241 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 MAOBP27338 520 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 NAP1L1P55209 391 aaKnown RBP18.32■□□□□ 0.52
CPSF4-205ENST00000440514 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
CPSF4-205ENST00000440514 PAFAH1B3Q15102 231 aaKnown RBP18.32■□□□□ 0.52
CPSF4-205ENST00000440514 CSRP2Q16527 193 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 NCEH1Q6PIU2 408 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 SYT12Q8IV01 421 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 RGL4Q8IZJ4 473 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 CADM4Q8NFZ8 388 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 OR14C36Q8NHC7 312 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 FOXJ1Q92949 421 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 FAM131CQ96AQ9 280 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 VOPP1Q96AW1 172 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 RNF157Q96PX1 679 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 VPS45Q9NRW7 570 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 EVLQ9UI08 416 aaPredicted RBP18.32■□□□□ 0.52
CPSF4-205ENST00000440514 PILRBQ9UKJ0 227 aa18.32■□□□□ 0.52
CPSF4-205ENST00000440514 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.32■□□□□ 0.52
CPSF4-205ENST00000440514 SHROOM3Q8TF72 1996 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 MACROD2A1Z1Q3 448 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 METTL12A8MUP2 240 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 INSIG1O15503 277 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 MAFKO60675 156 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 FSBPO95073 299 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 RGRP47804 291 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 GBE1Q04446 702 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 MYLK3Q32MK0 819 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 PIP5KL1Q5T9C9 394 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 PEAR1Q5VY43 1037 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-205ENST00000440514 PRR23CQ6ZRP0 262 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 PLPP6Q8IY26 295 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms