RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 B4GALNT1Q00973 533 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 EDRF1Q3B7T1 1238 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PITRM1Q5JRX3 1037 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 MMS22LQ6ZRQ5 1243 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 HPS6Q86YV9 775 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 SFTPA2Q8IWL1 248 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 SMC5Q8IY18 1101 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 ZNF808Q8N4W9 903 aaPredicted RBP11.38□□□□□ -0.59
RTN4-211ENST00000438462 NINJ1Q92982 152 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PLD4Q96BZ4 506 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 RNF31Q96EP0 1072 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 SGPP1Q9BX95 441 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 SLC17A9Q9BYT1 436 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 MARCH2Q9P0N8 246 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 LARSQ9P2J5 1176 aaKnown RBP11.38□□□□□ -0.59
RTN4-211ENST00000438462 FER1L5A0AVI2 2057 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 ABCA4P78363 2273 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 CPLX1O14810 134 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 CREG1O75629 220 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 MPSTP25325 297 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 ADSLP30566 484 aaPredicted RBP11.37□□□□□ -0.59
RTN4-211ENST00000438462 KRT2P35908 639 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 NOP2P46087 812 aaKnown RBP11.37□□□□□ -0.59
RTN4-211ENST00000438462 LIMK2P53671 638 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 ECT2LQ008S8 904 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 TRA2AQ13595 282 aaKnown RBP eCLIP11.37□□□□□ -0.593e-8■■■□□ 18.5
RTN4-211ENST00000438462 DCAF10Q5QP82 559 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 NRGNQ92686 78 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 CDK5RAP1Q96SZ6 601 aaKnown RBP11.37□□□□□ -0.59
RTN4-211ENST00000438462 FAM213AQ9BRX8 229 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 NUDT9Q9BW91 350 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 IKZF4Q9H2S9 585 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 STIM2Q9P246 746 aa11.37□□□□□ -0.59
RTN4-211ENST00000438462 ZGRF1Q86YA3 2104 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 NPHP3-ACAD11A0A0J9YXS1 232 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 KCNAB3O43448 404 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 B4GAT1O43505 415 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 THRAP10827 490 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 CCDC130P13994 396 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 MAN1A1P33908 653 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 STAT1P42224 750 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 NUMBP49757 651 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 PSEN1P49768 467 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 OR1D5P58170 312 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 YBX1P67809 324 aaKnown RBP11.36□□□□□ -0.59
RTN4-211ENST00000438462 PPARDQ03181 441 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 MAP7Q14244 749 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 CRB2Q5IJ48 1285 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 SLFN12LQ6IEE8 588 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 DUS1LQ6P1R4 473 aaKnown RBP11.36□□□□□ -0.59
RTN4-211ENST00000438462 CEACAM20Q6UY09 585 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 GKN2Q86XP6 184 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 ZNF557Q8N988 423 aaPredicted RBP11.36□□□□□ -0.59
RTN4-211ENST00000438462 ZSWIM2Q8NEG5 633 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 FDCSPQ8NFU4 85 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 POMGNT1Q8WZA1 660 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 EDEM3Q9BZQ6 932 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 ILKAPQ9H0C8 392 aaPredicted RBP11.36□□□□□ -0.59
RTN4-211ENST00000438462 ING2Q9H160 280 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 CSNK1G1Q9HCP0 422 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 APMAPQ9HDC9 416 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 CCM2LQ9NUG4 571 aaPredicted RBP11.36□□□□□ -0.59
RTN4-211ENST00000438462 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
RTN4-211ENST00000438462 STRIP2Q9ULQ0 834 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 B3GNT3Q9Y2A9 372 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 KIF3AQ9Y496 699 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 STYXL1Q9Y6J8 313 aa11.36□□□□□ -0.59
RTN4-211ENST00000438462 MYO7BQ6PIF6 2116 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 F5H423 210 aaPredicted RBP11.35□□□□□ -0.59
RTN4-211ENST00000438462 HAX1O00165 279 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 FANCGO15287 622 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
RTN4-211ENST00000438462 PRR29P0C7W0 189 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 CTSEP14091 401 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 XBP1P17861 261 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 CASP14P31944 242 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 KIR3DL1P43629 444 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 HLTFQ14527 1009 aaKnown RBP eCLIP11.35□□□□□ -0.591e-8■■□□□ 13
RTN4-211ENST00000438462 TRIP4Q15650 581 aaPredicted RBP11.35□□□□□ -0.59
RTN4-211ENST00000438462 RFWD3Q6PCD5 774 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 MACC1Q6ZN28 852 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 KCNMB4Q86W47 210 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 FIBINQ8TAL6 211 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 FRS2Q8WU20 508 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 INPP5DQ92835 1189 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 SAAL1Q96ER3 474 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 CCDC120Q96HB5 630 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 ANKRD36BP1Q96IX9 119 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 KLF6Q99612 283 aaPredicted RBP11.35□□□□□ -0.59
RTN4-211ENST00000438462 CLIC5Q9NZA1 410 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 USP25Q9UHP3 1055 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 STOML2Q9UJZ1 356 aa11.35□□□□□ -0.59
RTN4-211ENST00000438462 B4DGG1 531 aa11.34□□□□□ -0.59
RTN4-211ENST00000438462 HHLA1C9JL84 531 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms