RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KLF10Q13118 480 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PRKAA1Q13131 559 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ITGA9Q13797 1035 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 DGKDQ16760 1214 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ANO4Q32M45 955 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ANKRD20A4Q4UJ75 823 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 MDH1BQ5I0G3 518 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SH2D4BQ5SQS7 431 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 OLFML2BQ68BL8 750 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 NAIF1Q69YI7 327 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 IQSEC1Q6DN90 963 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 CCSAPQ6IQ19 270 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 NAPEPLDQ6IQ20 393 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 STRA8Q7Z7C7 330 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 CLEC14AQ86T13 490 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PIGZQ86VD9 579 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 CCDC117Q8IWD4 279 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 UNC5BQ8IZJ1 945 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SIX6OS1Q8N1H7 587 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 DCLK2Q8N568 766 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ARRDC4Q8NCT1 418 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 GSTCDQ8NEC7 633 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 FBXO27Q8NI29 283 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SLC7A14Q8TBB6 771 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SLC2A14Q8TDB8 520 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PDCD6IPQ8WUM4 868 aaKnown RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 UCMAQ8WVF2 138 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 KBTBD7Q8WVZ9 684 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 DLG3Q92796 817 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 HDAC11Q96DB2 347 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PGAP3Q96FM1 320 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ZMAT2Q96NC0 199 aaKnown RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 LGMNQ99538 433 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 TRIM62Q9BVG3 475 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 TRIM4Q9C037 500 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 GBA3Q9H227 469 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 COG4Q9H9E3 785 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 NMRAL1Q9HBL8 299 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 MRM3Q9HC36 420 aaKnown RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SETD4Q9NVD3 440 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PNPOQ9NVS9 261 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 TLK1Q9UKI8 766 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 NME7Q9Y5B8 376 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SCN5AQ14524 2016 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ATG2AQ2TAZ0 1938 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 NRCAMQ92823 1304 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 SMIM31A0A1B0GVY4 71 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 M0QYT0 321 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 RFXAPO00287 272 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 HDAC3O15379 428 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 PQBP1O60828 265 aaKnown RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ADAMTS4O75173 837 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 PDGFRBP09619 1106 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ERVK-10P10266 1014 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DARSP14868 501 aaKnown RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CSF2RAP15509 400 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 NCF2P19878 526 aaPredicted RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ITGAXP20702 1163 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 GLDCP23378 1020 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 PTPN3P26045 913 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ADORA2AP29274 412 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 LRPAP1P30533 357 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CYP2C18P33260 490 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 HTR7P34969 479 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ADRA1BP35368 520 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 MLH1P40692 756 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 TBL3Q12788 808 aaKnown RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 MPP3Q13368 585 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CUL3Q13618 768 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CCNIQ14094 377 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 GRM2Q14416 872 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DUSP28Q4G0W2 176 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DCAF6Q58WW2 860 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 PRAMEF19Q5SWL8 479 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 MARCH8Q5T0T0 291 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 LIPMQ5VYY2 423 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 KCTD11Q693B1 232 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 FSTL4Q6MZW2 842 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 MAMDC4Q6UXC1 1216 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ZYG11AQ6WRX3 759 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 MAVSQ7Z434 540 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 KBTBD6Q86V97 674 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 FAM131BQ86XD5 332 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 KLHDC8BQ8IXV7 354 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 KBTBD2Q8IY47 623 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DEFB107AQ8IZN7 70 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DNAAF3Q8N9W5 541 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 TDRD5Q8NAT2 981 aaKnown RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 KYQ8NBH2 561 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 B3GALNT2Q8NCR0 500 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ICA1LQ8NDH6 482 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 GABPB2Q8TAK5 448 aaPredicted RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 URGCPQ8TCY9 931 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 SLC26A7Q8TE54 656 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CLEC4CQ8WTT0 213 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 HERVK_113Q902F9 699 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 FAM149B1Q96BN6 582 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 ZBTB10Q96DT7 871 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DTNBP1Q96EV8 351 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms