RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PNMA5Q96PV4 448 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 AGPAT1Q99943 283 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TEX13BQ9BXU2 312 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 FANCFQ9NPI8 374 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZC4H2Q9NQZ6 224 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 IL17RBQ9NRM6 502 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 PAQR5Q9NXK6 330 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 DTLQ9NZJ0 730 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 EMC3Q9P0I2 261 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 CCNL1Q9UK58 526 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 CSNK1G3Q9Y6M4 447 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 UBR3Q6ZT12 1888 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 NAV1Q8NEY1 1877 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 LEUTXA8MZ59 168 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 CTDSP2O14595 271 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 ABCB7O75027 752 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 MAFO75444 373 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 DLGAP3O95886 979 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PDGFAP04085 211 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 KRT7P08729 469 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 USP17L8P0C7I0 530 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 BMP2P12643 396 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PROZP22891 400 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 HTR3AP46098 478 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SCRN3Q0VDG4 424 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 MERTKQ12866 999 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 C6orf132Q5T0Z8 1188 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 INTS11Q5TA45 600 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 CES4AQ5XG92 561 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 RINT1Q6NUQ1 792 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 CAMK1DQ8IU85 385 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 CCDC185Q8N715 623 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 FRS2Q8WU20 508 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 NAP1L4Q99733 375 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 ADI1Q9BV57 179 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 ANKHQ9HCJ1 492 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SMOXQ9NWM0 555 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 GGA3Q9NZ52 723 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRPC5Q9UL62 973 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PCDHA2Q9Y5H9 948 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SAC3D1A6NKF1 404 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 GPR25O00155 361 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 MEN1O00255 615 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRIM16O95361 564 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 VNN1O95497 513 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 GOT2P00505 430 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 IFNA14P01570 189 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 JUNP05412 331 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRAPPC2P0DI81 140 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRAPPC2BP0DI82 140 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 GZMAP12544 262 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 IL10P22301 178 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PTX3P26022 381 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 UGT2B10P36537 528 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SERPINH1P50454 418 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 NLRP11P59045 1033 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 RHDQ02161 417 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 TNK2Q07912 1038 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 KLF10Q13118 480 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PPIL2Q13356 520 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 MFSD13AQ14CX5 517 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 DGUOKQ16854 277 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 TBRG1Q3YBR2 411 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 RBM20Q5T481 1227 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC9A4Q6AI14 798 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 FCRLBQ6BAA4 426 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 STYK1Q6J9G0 422 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 GJB7Q6PEY0 223 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 CRTC3Q6UUV7 619 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 BBS12Q6ZW61 710 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 NIPA1Q7RTP0 329 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 VN1R5Q7Z5H4 357 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLCO6A1Q86UG4 719 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 CCDC103Q8IW40 242 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PGAM4Q8N0Y7 254 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZSWIM2Q8NEG5 633 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 MARC2Q969Z3 335 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM149B1Q96BN6 582 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 RNF170Q96K19 258 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 WACQ9BTA9 647 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PDGFDQ9GZP0 370 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 OR51B5Q9H339 312 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PRDM8Q9NQV8 689 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 BMP2KQ9NSY1 1161 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 FNIP2Q9P278 1114 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 PCDHA8Q9Y5H6 950 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 ROBO3Q96MS0 1386 aa8.98□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC16A3O15427 465 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 BPGMP07738 259 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 GNAO1P09471 354 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 MX2P20592 715 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 RFX1P22670 979 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 GRK3P35626 688 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PRIM2P49643 509 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 IDH3AP50213 366 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PTP4A2Q12974 167 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 BAMBIQ13145 260 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms