RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DYRK4Q9NR20 520 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 FBXL12Q9NXK8 326 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 DTLQ9NZJ0 730 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 IL36AQ9UHA7 158 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 RAB23Q9ULC3 237 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.81□□□□□ -0.04
SGCE-204ENST00000428696 DOCK4Q8N1I0 1966 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 hCG_1818297A0A087WSY0 165 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 PLK4O00444 970 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 KCNK3O14649 394 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 MCF2LO15068 1137 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 DDX3YO15523 660 aaKnown RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 KIF5CO60282 957 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 NDUFS2O75306 463 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 ZNF217O75362 1048 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 GARSP41250 739 aaKnown RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 TPMTP51580 245 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 CCNHP51946 323 aaPredicted RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 COPS2P61201 443 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 ADCY2Q08462 1091 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 SLC10A7Q0GE19 358 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 GALNT2Q10471 571 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 PDK1Q15118 436 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 MYLK3Q32MK0 819 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 TTC31Q49AM3 519 aaPredicted RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 INO80DQ53TQ3 878 aaPredicted RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 MARC1Q5VT66 337 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 FAM46CQ5VWP2 391 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 SLC9A4Q6AI14 798 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 ZC3H18Q86VM9 953 aaKnown RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 REXO1L1PQ8IX06 675 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 OR2AP1Q8NGE2 309 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 PIP4K2CQ8TBX8 421 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 CASKIN2Q8WXE0 1202 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 HES6Q96HZ4 224 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 GDAP1L1Q96MZ0 367 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 LGMNQ99538 433 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 HEPHQ9BQS7 1158 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 CD248Q9HCU0 757 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 ITM2CQ9NQX7 267 aa14.8□□□□□ -0.04
SGCE-204ENST00000428696 EVLQ9UI08 416 aaPredicted RBP14.8□□□□□ -0.04
SGCE-204ENST00000428696 ZNF318Q5VUA4 2279 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 CCDC163A0A0D9SF12 145 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 A0A1W2PP55 124 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 TTC24A2A3L6 582 aaPredicted RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 PRR23AA6NEV1 266 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 ZNF487B1APH4 448 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 C1QTNF3-AMACRE9PGA6 284 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 ZNF821O75541 412 aaPredicted RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 TJP3O95049 919 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 POP4O95707 220 aaKnown RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 IGSF6O95976 241 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 SCNN1BP51168 640 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 RAD51Q06609 339 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 FAM182AQ5T1J6 154 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 TMCO4Q5TGY1 634 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 MEI1Q5TIA1 1274 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 TIGD7Q6NT04 549 aaPredicted RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 BZW1Q7L1Q6 419 aaKnown RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 ADAT2Q7Z6V5 191 aaKnown RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 VSIG1Q86XK7 387 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 LRRC49Q8IUZ0 686 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 ZBTB44Q8NCP5 570 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 GAB3Q8WWW8 586 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 ISG20Q96AZ6 181 aaKnown RBP14.79□□□□□ -0.04
SGCE-204ENST00000428696 FAM118BQ9BPY3 351 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 PDFQ9HBH1 243 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 RBM22Q9NW64 420 aaKnown RBP eCLIP14.79□□□□□ -0.04
SGCE-204ENST00000428696 SEPT3Q9UH03 358 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
SGCE-204ENST00000428696 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 USP27XA6NNY8 438 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 H7C0C1 242 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 KCNK1O00180 336 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 ENC1O14682 589 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 PPP1R12AO14974 1030 aaPredicted RBP14.78□□□□□ -0.04
SGCE-204ENST00000428696 INSIG1O15503 277 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 LEFTY1O75610 366 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 ADH1BP00325 375 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 JCHAINP01591 159 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 PRNPP04156 253 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 CCNB1P14635 433 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 PECAM1P16284 738 aaPredicted RBP14.78□□□□□ -0.04
SGCE-204ENST00000428696 C5AR1P21730 350 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 TGM2P21980 687 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 CCNCP24863 283 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 CXCR5P32302 372 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 CNR2P34972 360 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 MMP13P45452 471 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 ATP5OP48047 213 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 NR2C2P49116 596 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 RENBPP51606 427 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 METAP1P53582 386 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 RPL6Q02878 288 aaKnown RBP14.78□□□□□ -0.04
SGCE-204ENST00000428696 ZBTB16Q05516 673 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 SFSWAPQ12872 951 aaKnown RBP14.78□□□□□ -0.04
SGCE-204ENST00000428696 RFTN1Q14699 578 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms