RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 INSIG1O15503 277 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 RASA4O43374 803 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 LATO43561 262 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 RAMP2O60895 175 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 CBFA2T3O75081 653 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 CEACAM1P13688 526 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 CTSKP43235 329 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 CCR5P51681 352 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 AFF3P51826 1226 aaKnown RBP12.98□□□□□ -0.33
GPC1-204ENST00000426280 CCNHP51946 323 aaPredicted RBP12.98□□□□□ -0.33
GPC1-204ENST00000426280 IL9RQ01113 521 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 FGL2Q14314 439 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 EFHC2Q5JST6 749 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 RETSATQ6NUM9 610 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 KDM7AQ6ZMT4 941 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 DBX2Q6ZNG2 339 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 ARHGAP36Q6ZRI8 547 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 SPATS2Q86XZ4 545 aaKnown RBP12.98□□□□□ -0.33
GPC1-204ENST00000426280 CELF6Q96J87 481 aaKnown RBP12.98□□□□□ -0.33
GPC1-204ENST00000426280 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 HEPHQ9BQS7 1158 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 PACSIN1Q9BY11 444 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 GRPEL1Q9HAV7 217 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 TM7SF3Q9NS93 570 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 HECAQ9UBI9 543 aaPredicted RBP12.98□□□□□ -0.33
GPC1-204ENST00000426280 IL36AQ9UHA7 158 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 GGT7Q9UJ14 662 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 AP4E1Q9UPM8 1137 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 BZW2Q9Y6E2 419 aaKnown RBP12.98□□□□□ -0.33
GPC1-204ENST00000426280 DOCK9Q9BZ29 2069 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 CHD5Q8TDI0 1954 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 TMEM131Q92545 1883 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 C1QTNF3-AMACRE9PGA6 284 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 SPINT1O43278 529 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 BUB1O43683 1085 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 RNGTTO60942 597 aaKnown RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 PRLRP16471 622 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 ABL2P42684 1182 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 GRIA4P48058 902 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 CLCN6P51797 869 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 RACK1P63244 317 aaKnown RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 SERINC3Q13530 473 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 ASTE1Q2TB18 679 aaPredicted RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 SEL1L3Q68CR1 1132 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 DSG4Q86SJ6 1040 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 ARHGAP12Q8IWW6 846 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 UMODL1-AS1Q8N2C9 162 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 PCDH20Q8N6Y1 951 aaKnown RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 NPWQ8N729 165 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 MYOCQ99972 504 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 LRRC19Q9H756 370 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 FZD3Q9NPG1 666 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 ETNK2Q9NVF9 386 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 CWC15Q9P013 229 aaKnown RBP12.97□□□□□ -0.33
GPC1-204ENST00000426280 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
GPC1-204ENST00000426280 A0A1W2PQU0 124 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ANKRD62A6NC57 917 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 VILLO15195 856 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 RAD51BO15315 384 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 CYP1A2P05177 515 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ERCC2P18074 760 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 AMPD1P23109 780 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 CDC25BP30305 580 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 RGRP47804 291 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 TPI1P60174 286 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 FOXC1Q12948 553 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ZNF423Q2M1K9 1284 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 SMTNL2Q2TAL5 461 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ZNF284Q2VY69 593 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ATP13A4Q4VNC1 1196 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 LRRC73Q5JTD7 316 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ERN2Q76MJ5 926 aaKnown RBP12.96□□□□□ -0.33
GPC1-204ENST00000426280 SLCO6A1Q86UG4 719 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 GATAD2AQ86YP4 633 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 RYBPQ8N488 228 aaPredicted RBP12.96□□□□□ -0.33
GPC1-204ENST00000426280 PNPLA1Q8N8W4 532 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ISG20Q96AZ6 181 aaKnown RBP12.96□□□□□ -0.33
GPC1-204ENST00000426280 SERAC1Q96JX3 654 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 EPAS1Q99814 870 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ZDHHC5Q9C0B5 715 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 CEP44Q9C0F1 390 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ZDHHC6Q9H6R6 413 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 PDFQ9HBH1 243 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 AASDHPPTQ9NRN7 309 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 LHX3Q9UBR4 397 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 ITM2BQ9Y287 266 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms