RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 SUFUQ9UMX1 484 aa5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CHTOPQ9Y3Y2 248 aaKnown RBP5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ENTPD2Q9Y5L3 495 aa5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SNX14Q9Y5W7 946 aa5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SNX9Q9Y5X1 595 aa5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 WDR19Q8NEZ3 1342 aa5.7□□□□□ -1.5
PTP4A1P1-201ENST00000420539 A0A1W2PQF6 199 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 EME2A4GXA9 379 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 AQP7P3A6NL99 342 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SLC38A8A6NNN8 435 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CDRT15L2A8MXV6 281 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TEX22C9J3V5 150 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FAM86B1E9PN63 330 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 L7N2F9 121 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ANGPT2O15123 496 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZSCAN9O15535 394 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MTRF1O75570 445 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HEXIM1O94992 359 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PTBP3O95758 552 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZFYP08048 801 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 C1SP09871 688 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KRT5P13647 590 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ETS1P14921 441 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PI3P19957 117 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GUCY1A2P33402 732 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RFC4P35249 363 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ADCY8P40145 1251 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PNPLA4P41247 253 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KHKP50053 298 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PMS2P54278 862 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RTP5Q14D33 572 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 INTS8Q75QN2 995 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ARMCX2Q7L311 632 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 BMP8AQ7Z5Y6 402 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CEP57Q86XR8 500 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TICAM1Q8IUC6 712 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CAMKVQ8NCB2 501 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 BCAS4Q8TDM0 211 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SMARCE1Q969G3 411 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MRPL38Q96DV4 380 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MASTLQ96GX5 879 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ERO1AQ96HE7 468 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SIGLEC10Q96LC7 697 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FAM227BQ96M60 508 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ADAD1Q96M93 576 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CD180Q99467 661 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PAFAH2Q99487 392 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PRRX2Q99811 253 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SRSF8Q9BRL6 282 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PIMREGQ9BSJ6 248 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TINAGL1Q9GZM7 467 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HAPLN2Q9GZV7 340 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FAM83DQ9H4H8 585 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 IARS2Q9NSE4 1012 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TMEM140Q9NV12 185 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CFAP97Q9P2B7 532 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 NCDNQ9UBB6 729 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SPASTQ9UBP0 616 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FBXL17Q9UF56 701 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TRPS1Q9UHF7 1281 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RUVBL1Q9Y265 456 aaKnown RBP5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ACTL7AQ9Y615 435 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TTC41PQ6P2S7 1318 aa5.69□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TCAF2A6NFQ2 919 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SLC33A1O00400 549 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SPAG6O75602 509 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SLITRK3O94933 977 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KCNK5O95279 499 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PRAMEF12O95522 483 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 IL18BPO95998 194 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PDGFBP01127 241 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KLKB1P03952 638 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CYC1P08574 325 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 UROSP10746 265 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MDH1P40925 334 aaKnown RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GCLCP48506 637 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CCR3P51677 355 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 IL13RA1P78552 427 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PMP22Q01453 160 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CBFBQ13951 182 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZNF750Q32MQ0 723 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 WDR72Q3MJ13 1102 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TBRG1Q3YBR2 411 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PLA1AQ53H76 456 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HS1BP3Q53T59 392 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MFSD14BQ5SR56 506 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZNF648Q5T619 568 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KCTD9Q7L273 389 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TAF8Q7Z7C8 310 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FSTL5Q8N475 847 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 BANPQ8N9N5 519 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KYQ8NBH2 561 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RBM15BQ8NDT2 890 aaKnown RBP5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FBXO18Q8NFZ0 1043 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TNIP2Q8NFZ5 429 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZNF480Q8WV37 535 aa5.68□□□□□ -1.5
PTP4A1P1-201ENST00000420539 LINC00615Q96LM1 132 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms