RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 CD86P42081 329 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 SGSHP51688 502 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 CDH4P55283 916 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 MSLNQ13421 630 aaPredicted RBP17.52■□□□□ 0.4
HDAC10-203ENST00000415993 PDE1CQ14123 709 aaPredicted RBP17.52■□□□□ 0.4
HDAC10-203ENST00000415993 LBRQ14739 615 aaKnown RBP17.52■□□□□ 0.4
HDAC10-203ENST00000415993 STRA8Q7Z7C7 330 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 ZNF354CQ86Y25 554 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 DNAJC5GQ8N7S2 189 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 ISL2Q96A47 359 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 ZBP1Q9H171 429 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 ZNF334Q9HCZ1 680 aaPredicted RBP17.52■□□□□ 0.4
HDAC10-203ENST00000415993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDAC10-203ENST00000415993 TXNDC16Q9P2K2 825 aa17.52■□□□□ 0.4
HDAC10-203ENST00000415993 F11P03951 625 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 F7P08709 466 aaPredicted RBP17.52■□□□□ 0.39
HDAC10-203ENST00000415993 ARNTP27540 789 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 HOXD9P28356 352 aaPredicted RBP17.52■□□□□ 0.39
HDAC10-203ENST00000415993 HTRA4P83105 476 aaPredicted RBP17.52■□□□□ 0.39
HDAC10-203ENST00000415993 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 CNPY4Q8N129 248 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 CCDC63Q8NA47 563 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 PTCD2Q8WV60 388 aaKnown RBP17.52■□□□□ 0.39
HDAC10-203ENST00000415993 IL21Q9HBE4 155 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 MRM3Q9HC36 420 aaKnown RBP17.52■□□□□ 0.39
HDAC10-203ENST00000415993 ARL2BPQ9Y2Y0 163 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 CHD5Q8TDI0 1954 aa17.52■□□□□ 0.39
HDAC10-203ENST00000415993 TTC24A2A3L6 582 aaPredicted RBP17.51■□□□□ 0.39
HDAC10-203ENST00000415993 CCDC78A2IDD5 438 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 MUSKO15146 869 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 CNPP09543 421 aaKnown RBP17.51■□□□□ 0.39
HDAC10-203ENST00000415993 SPATA31D3P0C874 917 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 MAGEA9P43362 315 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 MAGEA12P43365 314 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 ARCN1P48444 511 aaKnown RBP17.51■□□□□ 0.39
HDAC10-203ENST00000415993 LIMK2P53671 638 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 EPHB3P54753 998 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 GNA12Q03113 381 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 PCSK7Q16549 785 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 ADGRF1Q5T601 910 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 RNF187Q5TA31 235 aaPredicted RBP17.51■□□□□ 0.39
HDAC10-203ENST00000415993 FSTL4Q6MZW2 842 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 SPATA31D4Q6ZUB0 917 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 CCDC121Q6ZUS5 278 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 NSMCE1Q8WV22 266 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 ATP2A3Q93084 1043 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 SLC22A12Q96S37 553 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 MAGEH1Q9H213 219 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 KDM4CQ9H3R0 1056 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 TREX1Q9NSU2 369 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 STOML2Q9UJZ1 356 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 TCAF1Q9Y4C2 921 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 PCDHB12Q9Y5F1 795 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 KIAA1671Q9BY89 1806 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 GOLGA8TH3BQL2 631 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 CTSAP10619 480 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 NUMBP49757 651 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 ITKQ08881 620 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 RABGAP1LQ5R372 815 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 TMCO4Q5TGY1 634 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 PDPK2PQ6A1A2 396 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 TRPM8Q7Z2W7 1104 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 ARMC2Q8NEN0 867 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 CYP2S1Q96SQ9 504 aa17.51■□□□□ 0.39
HDAC10-203ENST00000415993 IARS2Q9NSE4 1012 aaKnown RBP17.51■□□□□ 0.39
HDAC10-203ENST00000415993 UXTQ9UBK9 157 aaPredicted RBP17.51■□□□□ 0.39
HDAC10-203ENST00000415993 ANAPC1Q9H1A4 1944 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 TGM5O43548 720 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 CLDN11O75508 207 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 GJB3O75712 270 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 OLFM2O95897 454 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 SPRP35270 261 aaPredicted RBP17.5■□□□□ 0.39
HDAC10-203ENST00000415993 ETFBP38117 255 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 ZXDBP98169 803 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 PDE1BQ01064 536 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 LACTB2Q53H82 288 aaPredicted RBP17.5■□□□□ 0.39
HDAC10-203ENST00000415993 STXBP5Q5T5C0 1151 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 ESRP1Q6NXG1 681 aaKnown RBP17.5■□□□□ 0.39
HDAC10-203ENST00000415993 DCLK2Q8N568 766 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 OR7D4Q8NG98 312 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 ZNF599Q96NL3 588 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 EMCNQ9ULC0 261 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 KLF11O14901 512 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 GREM1O60565 184 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 GSRP00390 522 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 IRF1P10914 325 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 BGNP21810 368 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 PPM1JQ5JR12 505 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 CNTN4Q8IWV2 1026 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 PPHLN1Q8NEY8 458 aaKnown RBP17.5■□□□□ 0.39
HDAC10-203ENST00000415993 ADAMTS19Q8TE59 1207 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 CLP1Q92989 425 aaKnown RBP17.5■□□□□ 0.39
HDAC10-203ENST00000415993 RMDN2Q96LZ7 410 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 ABCF3Q9NUQ8 709 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 SIRPGQ9P1W8 387 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 SLC2A6Q9UGQ3 507 aa17.5■□□□□ 0.39
HDAC10-203ENST00000415993 LOC285095A0A1B0GVY8 99 aa17.49■□□□□ 0.39
HDAC10-203ENST00000415993 ALG1LQ6GMV1 187 aa17.49■□□□□ 0.39
HDAC10-203ENST00000415993 CHST9Q7L1S5 443 aa17.49■□□□□ 0.39
HDAC10-203ENST00000415993 SLC25A41Q8N5S1 370 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms