RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNF805Q5CZA5 627 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 ARTNQ5T4W7 220 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 SH3PXD2AQ5TCZ1 1133 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 LRRC38Q5VT99 294 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 C22orf39Q6P5X5 142 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 FBXL19Q6PCT2 694 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 RFX8Q6ZV50 586 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 TFAP2DQ7Z6R9 452 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 GLRX5Q86SX6 157 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 DNAAF5Q86Y56 855 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 NDUFAF2Q8N183 169 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 SDR16C5Q8N3Y7 309 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 CCDC185Q8N715 623 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 OR14C36Q8NHC7 312 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 FAM71BQ8TC56 605 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 NSMCE1Q8WV22 266 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 GDAP1L1Q96MZ0 367 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 LENG8Q96PV6 779 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 TRIM5Q9C035 493 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 BRD8Q9H0E9 1235 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 DHX35Q9H5Z1 703 aaKnown RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 LRRC19Q9H756 370 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 ABHD10Q9NUJ1 306 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 TAS2R14Q9NYV8 317 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 ARHGAP20Q9P2F6 1191 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 IMPACTQ9P2X3 320 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 HECAQ9UBI9 543 aaPredicted RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 EIF2B4Q9UI10 523 aaKnown RBP6.51□□□□□ -1.37
USP54-202ENST00000413442 DNAI1Q9UI46 699 aa6.51□□□□□ -1.37
USP54-202ENST00000413442 A0A1W2PP55 124 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 C4orf47A7E2U8 309 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 TMEM110-MUSTN1A8MSY1 372 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 RASA4BC9J798 803 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 FAM72CH0Y354 149 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 KPNA3O00505 521 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 FLRT2O43155 660 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 RASA4O43374 803 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 PRAMEF11O60813 436 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ZNF821O75541 412 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 PROSCO94903 275 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 IPO7O95373 1038 aaKnown RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 LCA5LO95447 670 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 CD160O95971 181 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 IGSF6O95976 241 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 MT-CO1P00395 513 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 IGHV4-34P06331 123 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ADRB1P08588 477 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 C1SP09871 688 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ZFXP17010 805 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 ERCC2P18074 760 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 MX2P20592 715 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 DRD3P35462 400 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 CYLC1P35663 651 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 EIF4A3P38919 411 aaKnown RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 ADPRHP54922 357 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 CDH6P55285 790 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 C21orf59P57076 290 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 YPEL5P62699 121 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ARF5P84085 180 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 SGCGQ13326 291 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 AGERQ15109 404 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 SPA17Q15506 151 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ZNF423Q2M1K9 1284 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ARSIQ5FYB1 569 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 FAM72AQ5TYM5 149 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 AFMIDQ63HM1 303 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 NAPEPLDQ6IQ20 393 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 FAM72DQ6L9T8 149 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 TIGD7Q6NT04 549 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 BRAT1Q6PJG6 821 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 TMCO3Q6UWJ1 677 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 GDPD4Q6W3E5 623 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 DPY19L3Q6ZPD9 716 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 Q6ZVU0 165 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ADAT2Q7Z6V5 191 aaKnown RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 HORMAD1Q86X24 394 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 FAM72BQ86X60 149 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 CIR1Q86X95 450 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 TMTC1Q8IUR5 882 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 MINDY1Q8N5J2 469 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 AADATQ8N5Z0 425 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 FRMD1Q8N878 549 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 DENND6BQ8NEG7 585 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 OR7D4Q8NG98 312 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 OR52K2Q8NGK3 314 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 PSKH2Q96QS6 385 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 PANX2Q96RD6 677 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 SNRNP25Q9BV90 132 aaKnown RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 NUP85Q9BW27 656 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 THAP2Q9H0W7 228 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 C6orf106Q9H6K1 298 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 NHEJ1Q9H9Q4 299 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 EVA1BQ9NVM1 165 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 DDX56Q9NY93 547 aaKnown RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 MYO1AQ9UBC5 1043 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 UBA2Q9UBT2 640 aaPredicted RBP6.5□□□□□ -1.37
USP54-202ENST00000413442 ANAPC7Q9UJX3 599 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 NENFQ9UMX5 172 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 ANKRD6Q9Y2G4 727 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms