RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 DNMT3BQ9UBC3 853 aaKnown RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 SFMBT1Q9UHJ3 866 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 A0A1W2PRU2 124 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 F8W8V4 182 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 HNRNPRO43390 633 aaKnown RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 MAGEC1O60732 1142 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 OR6B1O95007 311 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TBX18O95935 607 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 F11P03951 625 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 RHOP08100 348 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 GJA1P17302 382 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 NTHL1P78549 312 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 CYP4F8P98187 520 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 EFEMP1Q12805 493 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 OTUD1Q5VV17 481 aaPredicted RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 GAREM2Q75VX8 874 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 PDZD4Q76G19 769 aaPredicted RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 BEND5Q7L4P6 421 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 NET1Q7Z628 596 aaPredicted RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 SPATA24Q86W54 205 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TMPRSS6Q8IU80 811 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 RHOT1Q8IXI2 618 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 ULK2Q8IYT8 1036 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TAB3Q8N5C8 712 aaPredicted RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 SHKBP1Q8TBC3 707 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 NMD3Q96D46 503 aaKnown RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 OLFM3Q96PB7 478 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 ATXN3LQ9H3M9 355 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TRPC7Q9HCX4 862 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 SSU72Q9NP77 194 aaKnown RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 DDIT4Q9NX09 232 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TMCO1Q9UM00 188 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TBC1D30Q9Y2I9 924 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TM9SF1O15321 606 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 LRCH4O75427 683 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TRUB2O95900 331 aaKnown RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 PENKP01210 267 aaPredicted RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 IFNB1P01574 187 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 TCF4P15884 667 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 PPP3CCP48454 512 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 ATXN1P54253 815 aaKnown RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 DEUP1Q05D60 604 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 PRKD1Q15139 912 aaPredicted RBP14.56□□□□□ -0.08
MINDY4-202ENST00000409881 HECTD3Q5T447 861 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 C1orf146Q5VVC0 180 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 SCYL2Q6P3W7 929 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 Q7L0L9 218 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 SATL1Q86VE3 508 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 ARFGAP1Q8N6T3 406 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 FAM111AQ96PZ2 611 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 RRN3Q9NYV6 651 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 PCSK1NQ9UHG2 260 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 SLC7A8Q9UHI5 535 aa14.56□□□□□ -0.08
MINDY4-202ENST00000409881 C2orf78A6NCI8 922 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MSI1O43347 362 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 VAV1P15498 845 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ACTR3P61158 418 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 RNASEH2BQ5TBB1 312 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 C6orf163Q5TEZ5 329 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ANKRD54Q6NXT1 300 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MIB1Q86YT6 1006 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MZB1Q8WU39 189 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MRPS31Q92665 395 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 NT5C3BQ969T7 300 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 CCDC28BQ9BUN5 200 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 SMOC2Q9H3U7 446 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 CLDND1Q9NY35 253 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 IL1RAPL1Q9NZN1 696 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 NRG2O14511 850 aaPredicted RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ZSCAN9O15535 394 aaPredicted RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 BUD23O43709 281 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 PABPC4LP0CB38 370 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MIPP30301 263 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 CCR2P41597 374 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 HDAC4P56524 1084 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ADAM15Q13444 863 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MORF4L2Q15014 288 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ACAP1Q15027 740 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 TRMT5Q32P41 509 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MSS51Q4VC12 460 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 TXNDC8Q6A555 127 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ADGRD1Q6QNK2 874 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 TMEM184AQ6ZMB5 413 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 RASSF3Q86WH2 238 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 KATNAL2Q8IYT4 538 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 ALLCQ8N6M5 410 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 TCEAL4Q96EI5 215 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 MPP4Q96JB8 637 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 OLA1Q9NTK5 396 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 PIGVQ9NUD9 493 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 RHBDL2Q9NX52 303 aa14.55□□□□□ -0.08
MINDY4-202ENST00000409881 PPARGC1AQ9UBK2 798 aaKnown RBP14.55□□□□□ -0.08
MINDY4-202ENST00000409881 PSTPIP1O43586 416 aa14.54□□□□□ -0.08
MINDY4-202ENST00000409881 TM7SF2O76062 418 aa14.54□□□□□ -0.08
MINDY4-202ENST00000409881 POU2F2P09086 479 aa14.54□□□□□ -0.08
MINDY4-202ENST00000409881 IMPDH2P12268 514 aa14.54□□□□□ -0.08
MINDY4-202ENST00000409881 POU3F3P20264 500 aaPredicted RBP14.54□□□□□ -0.08
MINDY4-202ENST00000409881 EPHA5P54756 1037 aa14.54□□□□□ -0.08
MINDY4-202ENST00000409881 HIF1AQ16665 826 aa14.54□□□□□ -0.08
MINDY4-202ENST00000409881 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms