RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ADRB3P13945 408 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 RRM1P23921 792 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 MAT2AP31153 395 aaKnown RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 CCNHP51946 323 aaPredicted RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 THOP1P52888 689 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 BNC1Q01954 994 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 SMAD1Q15797 465 aaKnown RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 PIP5KL1Q5T9C9 394 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 SCYL2Q6P3W7 929 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 KYAT3Q6YP21 454 aaKnown RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 LZTR1Q8N653 840 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 SCG3Q8WXD2 468 aaKnown RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 BAP1Q92560 729 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 AJAP1Q9UKB5 411 aaPredicted RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 DNAH14Q0VDD8 3507 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 A0A0D9SEW6 157 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 TMEM110-MUSTN1A8MSY1 372 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 RRP8O43159 456 aaKnown RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 BUB1O43683 1085 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 KDELR3O43731 214 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 SNAP91O60641 907 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 LRIG2O94898 1065 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 GZMAP12544 262 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 SPINK2P20155 84 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 GGCXP38435 758 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 NDST2P52849 883 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 TPI1P60174 286 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 RHOAP61586 193 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 YPEL5P62699 121 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 POLR2LP62875 67 aaKnown RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 TYRO3Q06418 890 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 RFTN1Q14699 578 aaPredicted RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 CCDC14Q49A88 953 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 OTUD1Q5VV17 481 aaPredicted RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 ACAD10Q6JQN1 1059 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 DPY19L3Q6ZPD9 716 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 LSMEM2Q8N112 164 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 SDR16C5Q8N3Y7 309 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 EMC1Q8N766 993 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 OR7D4Q8NG98 312 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 NSMCE1Q8WV22 266 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 ARHGEF2Q92974 986 aaKnown RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 TBATAQ96M53 351 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 PSMB7Q99436 277 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 CALN1Q9BXU9 219 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 SLC17A9Q9BYT1 436 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 CSNK1G3Q9Y6M4 447 aa13.08□□□□□ -0.32
SNORD88B-201ENST00000408454 GOLGA6L19H0YKK7 550 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 KRIT1O00522 736 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 SLC31A1O15431 190 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 SERPINC1P01008 464 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 GP1BAP07359 652 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 ATXN1LP0C7T5 689 aaKnown RBP13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 VAV1P15498 845 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 HTR1BP28222 390 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 RFC1P35251 1148 aaPredicted RBP13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 RENBPP51606 427 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PPP2CBP62714 309 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PPP2CAP67775 309 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 FAM193AP78312 1265 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PEX6Q13608 980 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 ASIC2Q16515 512 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 CCDC157Q569K6 752 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PPP1R15BQ5SWA1 713 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 MANEALQ5VSG8 457 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 SFMBT2Q5VUG0 894 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 DPY19L2P1Q6NXN4 242 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 BRAT1Q6PJG6 821 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 WDR59Q6PJI9 974 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 LINGO4Q6UY18 593 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 GDPD4Q6W3E5 623 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 MON1BQ7L1V2 547 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 ABI3BPQ7Z7G0 1075 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 PARGQ86W56 976 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 DNAAF5Q86Y56 855 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 EID2Q8N6I1 236 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 TMEM145Q8NBT3 493 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 CXorf40AQ8TE69 158 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 FNIP1Q8TF40 1166 aa13.07□□□□□ -0.32
SNORD88B-201ENST00000408454 SLC20A1Q8WUM9 679 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms