RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 DUSP4Q13115 394 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CAPRIN1Q14444 709 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 GRM3Q14832 879 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 STXBP5Q5T5C0 1151 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TPGS2Q68CL5 300 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 GDF6Q6KF10 455 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 FUKQ8N0W3 1084 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CCDC185Q8N715 623 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TRIML2Q8N7C3 387 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 STAG3L4Q8TBR4 150 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KCNV2Q8TDN2 545 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 PIK3R5Q8WYR1 880 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 PLD4Q96BZ4 506 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 PWWP2AQ96N64 755 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SH3GL1Q99961 368 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 BTBD10Q9BSF8 475 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 HMGXB4Q9UGU5 601 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SFMBT1Q9UHJ3 866 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TBC1D30Q9Y2I9 924 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC27A5Q9Y2P5 690 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 COL24A1Q17RW2 1714 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 GOLGA8TH3BQL2 631 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 QSOX1O00391 747 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ACSL4O60488 711 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SKAP2O75563 359 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CD48P09326 243 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TACR2P21452 398 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 LPOP22079 712 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KCNA4P22459 653 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 PBX3P40426 434 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 GSCP56915 257 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 IL10RBQ08334 325 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 OASLQ15646 514 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 C6orf10Q5SRN2 563 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 NECAB2Q7Z6G3 386 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SERINC5Q86VE9 423 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RELL1Q8IUW5 271 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KYQ8NBH2 561 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ATAD1Q8NBU5 361 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 DNAJC9Q8WXX5 260 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 C8orf48Q96LL4 319 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 PPP1R36Q96LQ0 422 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CCDC134Q9H6E4 229 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ATP13A3Q9H7F0 1226 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CYP4F12Q9HCS2 524 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CLIC5Q9NZA1 410 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 DTLQ9NZJ0 730 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 PGAP2Q9UHJ9 254 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TSR3Q9UJK0 312 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 AP3M1Q9Y2T2 418 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RWDD3Q9Y3V2 267 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SLX4Q8IY92 1834 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 YJEFN3A6XGL0 299 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KCNU1A8MYU2 1149 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 EVPLLA8MZ36 301 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 E7ENQ6 273 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KPNA5O15131 536 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TGDSO95455 350 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ZNF865P0CJ78 1059 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 VCLP18206 1134 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CDH2P19022 906 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 POLR2EP19388 210 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CYP2A7P20853 494 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 DGKAP23743 735 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 MAGEA11P43364 429 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CPA2P48052 419 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CDH4P55283 916 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 IL2P60568 153 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SULT2A1Q06520 285 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 BST1Q10588 318 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 MED21Q13503 144 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 FLOT2Q14254 428 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TAF5Q15542 800 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 MORN1Q5T089 497 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ARMC3Q5W041 872 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC9A4Q6AI14 798 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 C17orf99Q6UX52 265 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ANGPTL8Q6UXH0 198 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 MARK2Q7KZI7 788 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 DENND1CQ8IV53 801 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 APLFQ8IW19 511 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 HS6ST3Q8IZP7 471 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ZNF567Q8N184 647 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 NAT8LQ8N9F0 302 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 DBF4BQ8NFT6 615 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SEC14L1Q92503 715 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KCNN1Q92952 543 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TEKT5Q96M29 485 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ACE2Q9BYF1 805 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CIPCQ9C0C6 399 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RNF39Q9H2S5 420 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RGS17Q9UGC6 210 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 AGO1Q9UL18 857 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RAP2CQ9Y3L5 183 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ASB3Q9Y575 518 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 TLL2Q9Y6L7 1015 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 C15orf38-AP3S2A0A0A6YYH1 394 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 ARHGAP10A1A4S6 786 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms