RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 E2F1Q01094 437 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 SLC6A3Q01959 620 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 ZNF211Q13398 564 aaPredicted RBP18.36■□□□□ 0.53
HDAC11-204ENST00000404040 SETMARQ53H47 684 aaPredicted RBP18.36■□□□□ 0.53
HDAC11-204ENST00000404040 ZC3H12AQ5D1E8 599 aaKnown RBP18.36■□□□□ 0.53
HDAC11-204ENST00000404040 SYPL2Q5VXT5 272 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 WDR59Q6PJI9 974 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 KDM7AQ6ZMT4 941 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 CIR1Q86X95 450 aaPredicted RBP18.36■□□□□ 0.53
HDAC11-204ENST00000404040 SLC30A5Q8TAD4 765 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 OR8D1Q8WZ84 308 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 CCDC42Q96M95 316 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 POPDC2Q9HBU9 364 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 TMEM51Q9NW97 253 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 SARDHQ9UL12 918 aa18.36■□□□□ 0.53
HDAC11-204ENST00000404040 A0A1B0GVM2 712 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 TCAF2A6NFQ2 919 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 PRAMEF26H0Y7S4 382 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 DDX3XO00571 662 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDAC11-204ENST00000404040 AKR1B10O60218 316 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 MT-CO3P00414 261 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 VASPP50552 380 aaPredicted RBP18.35■□□□□ 0.53
HDAC11-204ENST00000404040 PLK1P53350 603 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 YWHAZP63104 245 aaKnown RBP18.35■□□□□ 0.53
HDAC11-204ENST00000404040 CNTN1Q12860 1018 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 STAT4Q14765 748 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 FAM46CQ5VWP2 391 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 CXorf57Q6NSI4 855 aaKnown RBP18.35■□□□□ 0.53
HDAC11-204ENST00000404040 FAM183BPQ6ZVS7 135 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 SLC26A9Q7LBE3 791 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
HDAC11-204ENST00000404040 SLC25A45Q8N413 288 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 TMEM145Q8NBT3 493 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 LGMNQ99538 433 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 PRMT1Q99873 361 aaKnown RBP18.35■□□□□ 0.53
HDAC11-204ENST00000404040 C11orf70Q9BRQ4 267 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 CA5BQ9Y2D0 317 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 PCDHB1Q9Y5F3 818 aa18.35■□□□□ 0.53
HDAC11-204ENST00000404040 ERVH48-1M5A8F1 160 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 ALOX15BO15296 676 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
HDAC11-204ENST00000404040 MYBL1P10243 752 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 EIF4A3P38919 411 aaKnown RBP18.34■□□□□ 0.53
HDAC11-204ENST00000404040 PCBP4P57723 403 aaKnown RBP18.34■□□□□ 0.53
HDAC11-204ENST00000404040 DAB2P98082 770 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 CFHR1Q03591 330 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 SLC18A3Q16572 532 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 POM121L1PQ3SYA9 428 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 TTC39BQ5VTQ0 682 aaPredicted RBP18.34■□□□□ 0.53
HDAC11-204ENST00000404040 OLFML1Q6UWY5 402 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 MON1BQ7L1V2 547 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 ARCQ7LC44 396 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 XYLT1Q86Y38 959 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 SPC24Q8NBT2 197 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 ZNF248Q8NDW4 579 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 OR4C6Q8NH72 309 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 KLHDC7BQ96G42 594 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 HIC2Q96JB3 615 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 NHEJ1Q9H9Q4 299 aaPredicted RBP18.34■□□□□ 0.53
HDAC11-204ENST00000404040 PREBQ9HCU5 417 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 RRN3Q9NYV6 651 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 PPM1HQ9ULR3 514 aa18.34■□□□□ 0.53
HDAC11-204ENST00000404040 C1QTNF3-AMACRE9PGA6 284 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 ATP9BO43861 1147 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 PLEKP08567 350 aaPredicted RBP18.33■□□□□ 0.52
HDAC11-204ENST00000404040 DGKAP23743 735 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 OXCT1P55809 520 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 TAS2R38P59533 333 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 PITX1P78337 314 aaPredicted RBP18.33■□□□□ 0.52
HDAC11-204ENST00000404040 RABGAP1LQ5R372 815 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 FAM102AQ5T9C2 384 aaPredicted RBP18.33■□□□□ 0.52
HDAC11-204ENST00000404040 CDCP2Q5VXM1 449 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 Q6ZVU0 165 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 TMTC1Q8IUR5 882 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 CCDC170Q8IYT3 715 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 MCOLN2Q8IZK6 566 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 ATP6V0D2Q8N8Y2 350 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 ZNF578Q96N58 590 aaPredicted RBP18.33■□□□□ 0.52
HDAC11-204ENST00000404040 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 ISCUQ9H1K1 167 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 UCKL1Q9NWZ5 548 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 SLC25A13Q9UJS0 675 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 HECTD1Q9ULT8 2610 aa18.33■□□□□ 0.52
HDAC11-204ENST00000404040 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 KCNU1A8MYU2 1149 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 MCF2LO15068 1137 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 NRDCO43847 1150 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 RNGTTO60942 597 aaKnown RBP18.32■□□□□ 0.52
HDAC11-204ENST00000404040 DAB1O75553 588 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-204ENST00000404040 THEGLP0DJG4 465 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 DESP17661 470 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 CYLC1P35663 651 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-204ENST00000404040 TMPRSS3P57727 454 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 EIF4EBP2Q13542 120 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-204ENST00000404040 HS1BP3Q53T59 392 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 ALKBH5Q6P6C2 394 aaKnown RBP18.32■□□□□ 0.52
HDAC11-204ENST00000404040 C3orf20Q8ND61 904 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 ALG14Q96F25 216 aa18.32■□□□□ 0.52
HDAC11-204ENST00000404040 MYOCQ99972 504 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms