RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ADAT2Q7Z6V5 191 aaKnown RBP29.81■■■□□ 2.36
USP42-202ENST00000404008 TSEN2Q8NCE0 465 aaKnown RBP29.81■■■□□ 2.36
USP42-202ENST00000404008 OR2AP1Q8NGE2 309 aa29.81■■■□□ 2.36
USP42-202ENST00000404008 COG1Q8WTW3 980 aa29.81■■■□□ 2.36
USP42-202ENST00000404008 FAM129BQ96TA1 746 aa29.81■■■□□ 2.36
USP42-202ENST00000404008 MKRN2Q9H000 416 aaKnown RBP29.81■■■□□ 2.36
USP42-202ENST00000404008 RSPH9Q9H1X1 276 aaPredicted RBP29.81■■■□□ 2.36
USP42-202ENST00000404008 KCNK1O00180 336 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 MCF2LO15068 1137 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 ALDH1A2O94788 518 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 TDGF1P13385 188 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 PRLRP16471 622 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 TCP1P17987 556 aaKnown RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 GABRG2P18507 467 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 MMP13P45452 471 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 RECQLP46063 649 aaPredicted RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 EIF3EP60228 445 aaKnown RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 SNRPD1P62314 119 aaKnown RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 ZNF235Q14590 738 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 SLC45A4Q5BKX6 768 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 ATXN7L2Q5T6C5 722 aaPredicted RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 DPY19L3Q6ZPD9 716 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 HMGB4Q8WW32 186 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 EXOC2Q96KP1 924 aa29.8■■■□□ 2.36
USP42-202ENST00000404008 C16orf45Q96MC5 204 aaPredicted RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 TTC7AQ9ULT0 858 aaPredicted RBP29.8■■■□□ 2.36
USP42-202ENST00000404008 MUSKO15146 869 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 ALOX15BO15296 676 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 C7P10643 843 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 NDUFV2P19404 249 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 CCNHP51946 323 aaPredicted RBP29.79■■■□□ 2.36
USP42-202ENST00000404008 IFI35P80217 286 aaPredicted RBP29.79■■■□□ 2.36
USP42-202ENST00000404008 SIX1Q15475 284 aaPredicted RBP29.79■■■□□ 2.36
USP42-202ENST00000404008 LONRF2Q1L5Z9 754 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 ANO7Q6IWH7 933 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 TSSK4Q6SA08 328 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 SYT10Q6XYQ8 523 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 RASSF3Q86WH2 238 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 BBS5Q8N3I7 341 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 CHST14Q8NCH0 376 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 MDGA1Q8NFP4 955 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 OR8D1Q8WZ84 308 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 MS4A14Q96JA4 679 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 MRGPRX1Q96LB2 322 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 GDAP1L1Q96MZ0 367 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 SLC6A17Q9H1V8 727 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 HECAQ9UBI9 543 aaPredicted RBP29.79■■■□□ 2.36
USP42-202ENST00000404008 FBXO4Q9UKT5 387 aa29.79■■■□□ 2.36
USP42-202ENST00000404008 FARP1Q9Y4F1 1045 aaPredicted RBP29.79■■■□□ 2.36
USP42-202ENST00000404008 H7C0C1 242 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 GALR2O43603 387 aaPredicted RBP29.78■■■□□ 2.36
USP42-202ENST00000404008 IGSF6O95976 241 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 RBP3P10745 1247 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 HOXA6P31267 233 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 HSPA9P38646 679 aaKnown RBP29.78■■■□□ 2.36
USP42-202ENST00000404008 RGRP47804 291 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 ATP5OP48047 213 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 TMPRSS6Q8IU80 811 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 PGBD5Q8N414 524 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 MAIP1Q8WWC4 291 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 IL12RB2Q99665 862 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 EBF1Q9UH73 591 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 EML5Q05BV3 1969 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 ANKRD36A6QL64 1941 aa29.78■■■□□ 2.36
USP42-202ENST00000404008 ZNF185O15231 689 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 CSTF1Q05048 431 aaKnown RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 NSUN2Q08J23 767 aaKnown RBP eCLIP29.77■■■□□ 2.36
USP42-202ENST00000404008 ZBTB17Q13105 803 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 CDKL3Q8IVW4 592 aaPredicted RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 SLC35B2Q8TB61 432 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 MGME1Q9BQP7 344 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 FRMD8P1Q9BZ68 369 aaPredicted RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 NT5MQ9NPB1 228 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 RBM22Q9NW64 420 aaKnown RBP eCLIP29.77■■■□□ 2.36
USP42-202ENST00000404008 BCCIPQ9P287 314 aaKnown RBP eCLIP29.77■■■□□ 2.36
USP42-202ENST00000404008 AMACRQ9UHK6 382 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 SAR1BQ9Y6B6 198 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 ZBTB24O43167 697 aaPredicted RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 RNASEH1O60930 286 aaKnown RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 JCHAINP01591 159 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 CTSLP07711 333 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 CASQ1P31415 396 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 CHRNA3P32297 505 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 PXNP49023 591 aaPredicted RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 RPS14P62263 151 aaKnown RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 ANGPT1Q15389 498 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 MYLK3Q32MK0 819 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 ZNF776Q68DI1 518 aaPredicted RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 HEATR6Q6AI08 1181 aaKnown RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 DSG4Q86SJ6 1040 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 ZSCAN30Q86W11 494 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 MMAAQ8IVH4 418 aaKnown RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 RYBPQ8N488 228 aaPredicted RBP29.77■■■□□ 2.36
USP42-202ENST00000404008 OR6K2Q8NGY2 324 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 ACTRT1Q8TDG2 376 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 HTR3CQ8WXA8 447 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 ATG4AQ8WYN0 398 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 VOPP1Q96AW1 172 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 HEPHQ9BQS7 1158 aa29.77■■■□□ 2.36
USP42-202ENST00000404008 C10orf88Q9H8K7 445 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms