RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CCDC13Q8IYE1 715 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 ZNF513Q8N8E2 541 aaPredicted RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 DTWD2Q8NBA8 298 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 LRIG1Q96JA1 1093 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 TEKT5Q96M29 485 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 MKRN2Q9H000 416 aaKnown RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 MBD1Q9UIS9 605 aaPredicted RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 LOC285095A0A1B0GVY8 99 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 TJP3O95049 919 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 TCF15Q12870 199 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 LBRQ14739 615 aaKnown RBP10.77□□□□□ -0.68
NUP98-205ENST00000397007 E2F5Q15329 346 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 MAP7D1Q3KQU3 841 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 TRMT11Q7Z4G4 463 aaKnown RBP10.77□□□□□ -0.68
NUP98-205ENST00000397007 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 AADATQ8N5Z0 425 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 MCCC1Q96RQ3 725 aaPredicted RBP10.77□□□□□ -0.68
NUP98-205ENST00000397007 LYSMD1Q96S90 227 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 HDAC8Q9BY41 377 aa10.77□□□□□ -0.68
NUP98-205ENST00000397007 POLR3BQ9NW08 1133 aaPredicted RBP10.77□□□□□ -0.68
NUP98-205ENST00000397007 TYW5A2RUC4 315 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 NRDCO43847 1150 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 SUN1O94901 812 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 POLR2EP19388 210 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 HSPA9P38646 679 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 PIP5KL1Q5T9C9 394 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 TIGD7Q6NT04 549 aaPredicted RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 RWDD4Q6NW29 188 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 EXOC4Q96A65 974 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 MS4A14Q96JA4 679 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 MRGPRX1Q96LB2 322 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 CALN1Q9BXU9 219 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 DNPEPQ9ULA0 475 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 MRFAP1Q9Y605 127 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 ATG2BQ96BY7 2078 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 SIN3BO75182 1162 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 TCP1P17987 556 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 MAGEA3P43357 314 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 METAP1P53582 386 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 GEMIN4P57678 1058 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 DMWDQ09019 674 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 AGBL4Q5VU57 503 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 RAVER1Q8IY67 606 aaKnown RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 GLIS1Q8NBF1 620 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 OR2T3Q8NH03 318 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 C1orf216Q8TAB5 229 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 CCDC26Q8TAB7 109 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 NAPGQ99747 312 aaPredicted RBP10.77□□□□□ -0.69
NUP98-205ENST00000397007 ITM2CQ9NQX7 267 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 RNF14Q9UBS8 474 aa10.77□□□□□ -0.69
NUP98-205ENST00000397007 KIF5CO60282 957 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 PDK1Q15118 436 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 TEX44Q53QW1 395 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ZNF567Q8N184 647 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 PRSS33Q8NF86 280 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 LRFN3Q9BTN0 628 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ARNT2Q9HBZ2 717 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 CACNA2D2Q9NY47 1150 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 AP1G1O43747 822 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 KLF8O95600 359 aaPredicted RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 NDUFV2P19404 249 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 MX2P20592 715 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ZBTB16Q05516 673 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ELAVL3Q14576 367 aaKnown RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 P3H1Q32P28 736 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 EOGTQ5NDL2 527 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 DENND5AQ6IQ26 1287 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 USP30Q70CQ3 517 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ZNF534Q76KX8 674 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 TXNDC5Q8NBS9 432 aaKnown RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 OR2AP1Q8NGE2 309 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ZC3H10Q96K80 434 aaKnown RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 FCRL5Q96RD9 977 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 VAT1Q99536 393 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 MLPHQ9BV36 600 aaPredicted RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 VPS28Q9UK41 221 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 AREL1O15033 823 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 INSIG1O15503 277 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 ATP5BP06576 529 aaKnown RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 ATXN1LP0C7T5 689 aaKnown RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 DGKEP52429 567 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 DLG2Q15700 870 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 CARD16Q5EG05 197 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 LINGO4Q6UY18 593 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 CHST14Q8NCH0 376 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 MDGA1Q8NFP4 955 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 BHMTQ93088 406 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 CD93Q9NPY3 652 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 FZD4Q9ULV1 537 aa10.76□□□□□ -0.69
NUP98-205ENST00000397007 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
NUP98-205ENST00000397007 KCNK3O14649 394 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 DCNP07585 359 aaKnown RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 CCNB1P14635 433 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 RALGDSQ12967 914 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 TSEN2Q8NCE0 465 aaKnown RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 PIH1D2Q8WWB5 315 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 GBA3Q9H227 469 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 PABPC3Q9H361 631 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms