RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PEX11BO96011 259 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 ADH1BP00325 375 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 IL1BP01584 269 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 CCNCP24863 283 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 CHRNA3P32297 505 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 CCNHP51946 323 aaPredicted RBP19.51■□□□□ 0.71
HOXA9-202ENST00000396345 NHLH1Q02575 133 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 LBRQ14739 615 aaKnown RBP19.51■□□□□ 0.71
HOXA9-202ENST00000396345 PDK1Q15118 436 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 ATXN7L2Q5T6C5 722 aaPredicted RBP19.51■□□□□ 0.71
HOXA9-202ENST00000396345 CCDC181Q5TID7 509 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 DCAF12L1Q5VU92 463 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 TIGD7Q6NT04 549 aaPredicted RBP19.51■□□□□ 0.71
HOXA9-202ENST00000396345 BBS12Q6ZW61 710 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 OR2AP1Q8NGE2 309 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 RLN3Q8WXF3 142 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 HDAC11Q96DB2 347 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 SPACA7Q96KW9 195 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 GDAP1L1Q96MZ0 367 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 HEPHQ9BQS7 1158 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 CINPQ9BW66 212 aaPredicted RBP19.51■□□□□ 0.71
HOXA9-202ENST00000396345 ITM2CQ9NQX7 267 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 SAE1Q9UBE0 346 aaPredicted RBP19.51■□□□□ 0.71
HOXA9-202ENST00000396345 LHX3Q9UBR4 397 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 IL36AQ9UHA7 158 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 PPM1HQ9ULR3 514 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 SCML1Q9UN30 329 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 INVSQ9Y283 1065 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 FANCMQ8IYD8 2048 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 USP27XA6NNY8 438 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 MATN3O15232 486 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 MID1O15344 667 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 HRO43593 1189 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 KIF5CO60282 957 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 LILRB5O75023 590 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 RPP40O75818 363 aaKnown RBP19.5■□□□□ 0.71
HOXA9-202ENST00000396345 PECAM1P16284 738 aaPredicted RBP19.5■□□□□ 0.71
HOXA9-202ENST00000396345 SLC8A1P32418 973 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 P2RY2P41231 377 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 TPMTP51580 245 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 SLC10A7Q0GE19 358 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 SRSF5Q13243 272 aaKnown RBP19.5■□□□□ 0.71
HOXA9-202ENST00000396345 MYLK3Q32MK0 819 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 MAP7D1Q3KQU3 841 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 TTC31Q49AM3 519 aaPredicted RBP19.5■□□□□ 0.71
HOXA9-202ENST00000396345 ZNF569Q5MCW4 686 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 FAM46CQ5VWP2 391 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 BBS5Q8N3I7 341 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 TMIEQ8NEW7 156 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 PIP4K2CQ8TBX8 421 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 LRRN4Q8WUT4 740 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 GAB3Q8WWW8 586 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 P3H4Q92791 437 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 HAUS1Q96CS2 278 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 OLFM3Q96PB7 478 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 LGMNQ99538 433 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 HERPUD2Q9BSE4 406 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 BRD8Q9H0E9 1235 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 PABPC3Q9H361 631 aaKnown RBP19.5■□□□□ 0.71
HOXA9-202ENST00000396345 ZDHHC6Q9H6R6 413 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 USP36Q9P275 1121 aaKnown RBP19.5■□□□□ 0.71
HOXA9-202ENST00000396345 SEPT3Q9UH03 358 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 SARDHQ9UL12 918 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 CYP8B1Q9UNU6 501 aa19.5■□□□□ 0.71
HOXA9-202ENST00000396345 C1QTNF3-AMACRE9PGA6 284 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 PPP1R12AO14974 1030 aaPredicted RBP19.49■□□□□ 0.71
HOXA9-202ENST00000396345 TJP3O95049 919 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 POP4O95707 220 aaKnown RBP19.49■□□□□ 0.71
HOXA9-202ENST00000396345 PRNPP04156 253 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 CTSLP07711 333 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 C5AR1P21730 350 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 RENBPP51606 427 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 RAD51Q06609 339 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 PPIDQ08752 370 aaKnown RBP19.49■□□□□ 0.71
HOXA9-202ENST00000396345 SFSWAPQ12872 951 aaKnown RBP19.49■□□□□ 0.71
HOXA9-202ENST00000396345 ZNF235Q14590 738 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 ARSIQ5FYB1 569 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 SEL1L2Q5TEA6 688 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 MARC1Q5VT66 337 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 ALYREFQ86V81 257 aaKnown RBP19.49■□□□□ 0.71
HOXA9-202ENST00000396345 CCDC13Q8IYE1 715 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 TSEN2Q8NCE0 465 aaKnown RBP19.49■□□□□ 0.71
HOXA9-202ENST00000396345 OR6K2Q8NGY2 324 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 GRIN3AQ8TCU5 1115 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 GANCQ8TET4 914 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 FATE1Q969F0 183 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 EXOC2Q96KP1 924 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 TLR10Q9BXR5 811 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 CD93Q9NPY3 652 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 FAM86C1Q9NVL1 165 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 WASF2Q9Y6W5 498 aa19.49■□□□□ 0.71
HOXA9-202ENST00000396345 APOC4-APOC2K7ER74 178 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 KRIT1O00522 736 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 KCNK3O14649 394 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 LEFTY1O75610 366 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 APOC2P02655 101 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 MSNP26038 577 aaKnown RBP19.48■□□□□ 0.71
HOXA9-202ENST00000396345 OXTRP30559 389 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 GKP32189 559 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 HSPA9P38646 679 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms