RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PIWIL1Q96J94 861 aaKnown RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 SEPT11Q9NVA2 429 aaKnown RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 DDX18Q9NVP1 670 aaKnown RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 TMEM248Q9NWD8 314 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 DTLQ9NZJ0 730 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ZMYM5Q9UJ78 669 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ITGB1BP2Q9UKP3 347 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 AP4E1Q9UPM8 1137 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 KANSL1LA0AUZ9 987 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 C19orf67A6NJJ6 358 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 E9PBE3 544 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 FKBP6O75344 327 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CSDE1O75534 798 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 WISP3O95389 354 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 TFAP2AP05549 437 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 KRT19P08727 400 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 AKAP5P24588 427 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CD52P31358 61 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 PHBP35232 272 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 MAPKAPK2P49137 400 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 HK2P52789 917 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 COG7P83436 770 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 DCTN2Q13561 401 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 LLGL1Q15334 1064 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 VARS2Q5ST30 1063 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 C6orf183Q5T699 404 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 BORAQ6PGQ7 559 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 GLB1LQ6UWU2 654 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 KYAT3Q6YP21 454 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 RIPOR1Q6ZS17 1223 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CHST9Q7L1S5 443 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 TMEM135Q86UB9 458 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CAND1Q86VP6 1230 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 BBS5Q8N3I7 341 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 OR10T2Q8NGX3 314 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 C17orf50Q8WW18 174 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SIGLEC10Q96LC7 697 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 GAD1Q99259 594 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 COLEC11Q9BWP8 271 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 FAM49AQ9H0Q0 323 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 GBA3Q9H227 469 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 TMEM30AQ9NV96 361 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 DNAJC17Q9NVM6 304 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 PLK2Q9NYY3 685 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 PPM1HQ9ULR3 514 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 MTO1Q9Y2Z2 717 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 NR2E3Q9Y5X4 410 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CALCAP01258 141 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 EPOP01588 193 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 DLDP09622 509 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 ESRRAP11474 423 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 CCDC130P13994 396 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 VCLP18206 1134 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 GNALP38405 381 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 RPL5P46777 297 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 ACADVLP49748 655 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SERPINB9P50453 376 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CHN2P52757 468 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 EPHA5P54756 1037 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 GEMIN4P57678 1058 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 EIF3EP60228 445 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 WASHC5Q12768 1159 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SLC10A2Q12908 348 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 PDE1CQ14123 709 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 RFTN1Q14699 578 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 LRRC36Q1X8D7 754 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 USP41Q3LFD5 358 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SFT2D3Q587I9 215 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CYP4F22Q6NT55 531 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 LLGL2Q6P1M3 1020 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 C1orf228Q6PIY5 440 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SLC39A5Q6ZMH5 540 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 RNF111Q6ZNA4 994 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 Q6ZNX1 250 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 RBM44Q6ZP01 1051 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 ANKS3Q6ZW76 656 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SCD5Q86SK9 330 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 METTL25Q8N6Q8 603 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 OR6B3Q8NGW1 331 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 CCDC110Q8TBZ0 833 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 RNF139Q8WU17 664 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 MYLPFQ96A32 169 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 FAM84AQ96KN4 292 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 FCRL2Q96LA5 508 aaPredicted RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 PWWP2AQ96N64 755 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SERPINB11Q96P15 392 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 FCRL5Q96RD9 977 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 ADAM2Q99965 735 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 NACA2Q9H009 215 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS41-203ENST00000395969 SPATA7Q9P0W8 599 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SEPT3Q9UH03 358 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 ZNF148Q9UQR1 794 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 DMTF1Q9Y222 760 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 TTLL3Q9Y4R7 772 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 PCDHA11Q9Y5I1 949 aa5.45□□□□□ -1.54
VPS41-203ENST00000395969 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.45□□□□□ -1.54
VPS41-203ENST00000395969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms