RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 DSG4Q86SJ6 1040 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ABCA7Q8IZY2 2146 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 STK40Q8N2I9 435 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 BBS5Q8N3I7 341 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 CCNYQ8ND76 341 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 TMIEQ8NEW7 156 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 OR2AP1Q8NGE2 309 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ACTL9Q8TC94 416 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 HMGB4Q8WW32 186 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 OR8D1Q8WZ84 308 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 SIPA1Q96FS4 1042 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 PSKH2Q96QS6 385 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 LGMNQ99538 433 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 MKRN2Q9H000 416 aaKnown RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 TNKS2Q9H2K2 1166 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 SAE1Q9UBE0 346 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 LHX3Q9UBR4 397 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ZKSCAN5Q9Y2L8 839 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ANKRD36A6QL64 1941 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 WDR87Q6ZQQ6 2873 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CES2O00748 559 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 AXIN1O15169 862 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 MTSS1O43312 755 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 IGSF6O95976 241 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 SP9P0CG40 484 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CCNB1P14635 433 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 PRLRP16471 622 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 NDUFV2P19404 249 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CHRNA3P32297 505 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 MMP13P45452 471 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CCNHP51946 323 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 RPS14P62263 151 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 IFI35P80217 286 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 OTUD4Q01804 1114 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 RAD51Q06609 339 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 PRKD1Q15139 912 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 MYLK3Q32MK0 819 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 ANO7Q6IWH7 933 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 TSSK4Q6SA08 328 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 WDR5BQ86VZ2 330 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 LONP2Q86WA8 852 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 C17orf53Q8N3J3 647 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CHST14Q8NCH0 376 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 MDGA1Q8NFP4 955 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 TFB1MQ8WVM0 346 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 MAIP1Q8WWC4 291 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 PRCCQ92733 491 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 LRIG1Q96JA1 1093 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 GDAP1L1Q96MZ0 367 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 WDR24Q96S15 920 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 IL12RB2Q99665 862 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 HEPHQ9BQS7 1158 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CINPQ9BW66 212 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 FRMD8P1Q9BZ68 369 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 CPEB1Q9BZB8 566 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 ITM2CQ9NQX7 267 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 HECAQ9UBI9 543 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 PPM1HQ9ULR3 514 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 TTC7AQ9ULT0 858 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-202ENST00000374676 SCML1Q9UN30 329 aa11.54□□□□□ -0.56
HSPG2-202ENST00000374676 TCRBV7S2A1N4TA0A589 114 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 BNIP3LO60238 219 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 CEP104O60308 925 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF189O75820 626 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ADH1BP00325 375 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 JCHAINP01591 159 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 PRNPP04156 253 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 CES1P23141 567 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 CXCR5P32302 372 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 FNTBP49356 437 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ETF1P62495 437 aaKnown RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 DMWDQ09019 674 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 AP1B1Q10567 949 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 BYSLQ13895 437 aaKnown RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF235Q14590 738 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 GRM3Q14832 879 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 CST6Q15828 149 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 SLC45A4Q5BKX6 768 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 RALGPS1Q5JS13 557 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 FAM46CQ5VWP2 391 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 PAPD7Q5XG87 772 aaKnown RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ALG1LQ6GMV1 187 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 SRLQ86TD4 932 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ZC3H18Q86VM9 953 aaKnown RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 MMAAQ8IVH4 418 aaKnown RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 PGBD3Q8N328 593 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 RASGEF1CQ8N431 466 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 PIP4K2CQ8TBX8 421 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 LRRN4Q8WUT4 740 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 VOPP1Q96AW1 172 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 HAUS1Q96CS2 278 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ERLEC1Q96DZ1 483 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 QKIQ96PU8 341 aaKnown RBP eCLIP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 OSBPL9Q96SU4 736 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms