RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 LTA4HP09960 611 aaKnown RBP14.38□□□□□ -0.11
LMX1B-202ENST00000373474 TUBA4AP68366 448 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 MACC1Q6ZN28 852 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 TMEM132CQ8N3T6 1108 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 POC5Q8NA72 575 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 TSPAN14Q8NG11 270 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 ACO2Q99798 780 aaKnown RBP14.38□□□□□ -0.11
LMX1B-202ENST00000373474 HSD17B14Q9BPX1 270 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 ZNF670Q9BS34 389 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 WDR12Q9GZL7 423 aaKnown RBP14.38□□□□□ -0.11
LMX1B-202ENST00000373474 WTIPA6NIX2 430 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-202ENST00000373474 ALOX15BO15296 676 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 FGF10O15520 208 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-202ENST00000373474 POMCP01189 267 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 GPC1P35052 558 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 BBS12Q6ZW61 710 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 PWWP2AQ96N64 755 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 LIMD1Q9UGP4 676 aa14.38□□□□□ -0.11
LMX1B-202ENST00000373474 PSMD12O00232 456 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 SYNCRIPO60506 623 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ZNF7P17097 686 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 UBA1P22314 1058 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 SWT1Q5T5J6 900 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ZCCHC8Q6NZY4 707 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 MILR1Q7Z6M3 343 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 VSIG10LQ86VR7 867 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 STX12Q86Y82 276 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 PALB2Q86YC2 1186 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 C12orf56Q8IXR9 622 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 BORCS5Q969J3 196 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ING3Q9NXR8 418 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 KLHL28Q9NXS3 571 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 SH3BP4Q9P0V3 963 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 TMCO1Q9UM00 188 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 RGS14O43566 566 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 USP12O75317 370 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 MAFO75444 373 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 KRT36O76013 467 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 NFICP08651 508 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 PAICSP22234 425 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 IL12AP29459 219 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 GABRB2P47870 512 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 STARP49675 285 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 UBAP2LQ14157 1087 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 LIN54Q6MZP7 749 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 DHDDSQ86SQ9 333 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 AKAP14Q86UN6 197 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 IQCKQ8N0W5 287 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ITFG1Q8TB96 612 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 SEC22BO75396 215 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 HOXA10P31260 410 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 DDR1Q08345 913 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 CELF3Q5SZQ8 465 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 SLC25A24Q6NUK1 477 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 TAF8Q7Z7C8 310 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ZDHHC13Q8IUH4 622 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 IZUMO1Q8IYV9 350 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 RDH11Q8TC12 318 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 PURBQ96QR8 312 aaKnown RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 HGH1Q9BTY7 390 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 CCDC28BQ9BUN5 200 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ARMC7Q9H6L4 198 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 KANSL3Q9P2N6 904 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 BTN3A1O00481 513 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 CXCL11O14625 94 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 MYL4P12829 197 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ADSSP30520 456 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 FMO4P31512 558 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ABATP80404 500 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 BST1Q10588 318 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 TRABD2AQ86V40 505 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 SLC44A2Q8IWA5 706 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ULBP1Q9BZM6 244 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 RTN3O95197 1032 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-202ENST00000373474 EPHB3P54753 998 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 CRADDP78560 199 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 STK32CQ86UX6 486 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 FAM126BQ8IXS8 530 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 OSBPL6Q9BZF3 934 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 EPB41L4BQ9H329 900 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 KLHL1Q9NR64 748 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ABCC13Q9NSE7 274 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 ADPRHL2Q9NX46 363 aa14.37□□□□□ -0.11
LMX1B-202ENST00000373474 LSM1O15116 133 aaKnown RBP14.36□□□□□ -0.11
LMX1B-202ENST00000373474 ITGB6P18564 788 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 CDC25CP30307 473 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 IFNGR2P38484 337 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 GRIK3Q13003 919 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 HGSNATQ68CP4 663 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 DENND5AQ6IQ26 1287 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 ATG14Q6ZNE5 492 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 TMEM169Q96HH4 297 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 PPP2R1BP30154 601 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 TTC23Q5W5X9 447 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 METTL6Q8TCB7 284 aa14.36□□□□□ -0.11
LMX1B-202ENST00000373474 EBNA1BP2Q99848 306 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms