RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PGLYRP2Q96PD5 576 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 EBNA1BP2Q99848 306 aaKnown RBP11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 LPIN3Q9BQK8 851 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 MECRQ9BV79 373 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 MRPS26Q9BYN8 205 aaKnown RBP11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 BCO2Q9BYV7 579 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 CYP3A43Q9HB55 503 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 RAB6BQ9NRW1 208 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 FNIP2Q9P278 1114 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 VPS28Q9UK41 221 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 PSMD13Q9UNM6 376 aa11.66□□□□□ -0.54
TSPAN1-201ENST00000372003 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 NLRC5Q86WI3 1866 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 ARHGAP10A1A4S6 786 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 OR6C75A6NL08 312 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 CXorf49A8MYA2 514 aaPredicted RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 H7C0C1 242 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SLC22A2O15244 555 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 TGM5O43548 720 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SIN3BO75182 1162 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 PIAS1O75925 651 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 USP1O94782 785 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 MLNP12872 115 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 CPA3P15088 417 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 PCSK1P29120 753 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 ATP5OP48047 213 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SLC1A6P48664 564 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 ZNF143P52747 638 aaPredicted RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 HK2P52789 917 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 NDST1P52848 882 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 MTTPP55157 894 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 HYAL1Q12794 435 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 DUSP6Q16828 381 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SMTNL2Q2TAL5 461 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SLC39A12Q504Y0 691 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 CYP4A22Q5TCH4 519 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 CES4AQ5XG92 561 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 STEAP4Q687X5 459 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SLC8B1Q6J4K2 584 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 DENND1BQ6P3S1 775 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 UNC5AQ6ZN44 842 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 RNF111Q6ZNA4 994 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 LRRTM3Q86VH5 581 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 CAND1Q86VP6 1230 aaKnown RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 RNF157Q96PX1 679 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 SERPINI1Q99574 410 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 ACBD6Q9BR61 282 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 RTKNQ9BST9 563 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 DPEP3Q9H4B8 488 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 C10orf88Q9H8K7 445 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 TIMMDC1Q9NPL8 285 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 IRAK4Q9NWZ3 460 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 HMGXB4Q9UGU5 601 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 ADAMTS6Q9UKP5 1117 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 ARHGAP26Q9UNA1 814 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 POMPQ9Y244 141 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 PLXNA4Q9HCM2 1894 aa11.65□□□□□ -0.54
TSPAN1-201ENST00000372003 A0A1B0GVG6 124 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 WDR27A2RRH5 827 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 MYBPHLA2RUH7 354 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 LINC01565O15544 149 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ALDH1A2O94788 518 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 STK10O94804 968 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 GLUD1P00367 558 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CAPNS1P04632 268 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CD48P09326 243 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 FAM163BP0C2L3 166 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 FGF3P11487 239 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 EPCAMP16422 314 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ADSLP30566 484 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 FDFT1P37268 417 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 HARS2P49590 506 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CLCN4P51793 760 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 AQP4P55087 323 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC25A3Q00325 362 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TSPY1Q01534 308 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 FOLH1Q04609 750 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 RAB33AQ14088 237 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 BOLA3Q53S33 107 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 KCNT1Q5JUK3 1230 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 FAXCQ5TGI0 409 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ARMC3Q5W041 872 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CDKL3Q8IVW4 592 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ADCY4Q8NFM4 1077 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CDKL2Q92772 493 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SIGLEC10Q96LC7 697 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TWNKQ96RR1 684 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TBCBQ99426 244 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 EBF4Q9BQW3 602 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CNPY3Q9BT09 278 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CALN1Q9BXU9 219 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 OXCT2Q9BYC2 517 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC13A1Q9BZW2 595 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms