RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 MTAPQ13126 283 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LEXMQ3ZCV2 418 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CCDC14Q49A88 953 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 SMUG1Q53HV7 270 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ANKS1BQ7Z6G8 1248 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LCA5Q86VQ0 697 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LZICQ8WZA0 190 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 BAP1Q92560 729 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 RAPGEF5Q92565 580 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 TBC1D31Q96DN5 1066 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 BTN2A3PQ96KV6 586 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 SIRPGQ9P1W8 387 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 A0A1W2PQC6 194 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 KANSL1LA0AUZ9 987 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 MTA2O94776 668 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 RBP3P10745 1247 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 COL9A1P20849 921 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 MMP8P22894 467 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ADCY8P40145 1251 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 PHEXP78562 749 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 XKR4Q5GH76 650 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ERMARDQ5T6L9 678 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 TCEAL6Q6IPX3 200 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 MFSD7Q6UXD7 560 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 APLFQ8IW19 511 aaPredicted RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 FAM71DQ8N9W8 422 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 WFDC5Q8TCV5 224 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 TCEAL3Q969E4 200 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 HSPA12BQ96MM6 686 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 FUCA2Q9BTY2 467 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ZYG11BQ9C0D3 744 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 IL21Q9HBE4 155 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 SCML2Q9UQR0 700 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 CHKBQ9Y259 395 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 HS3ST4Q9Y661 456 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ZNF646O15015 1829 aaPredicted RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 PI4KAP42356 2102 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ATRXP46100 2492 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 PTPRQQ9UMZ3 2332 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 GTPBP10A4D1E9 387 aaKnown RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 KRBA1A5PL33 1030 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 J3KR12 359 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 IRAK2O43187 625 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 APRTP07741 180 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 SRFP11831 508 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 SLC8A1P32418 973 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 CLK1P49759 484 aaKnown RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 CCT8P50990 548 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 EIF3EP60228 445 aaKnown RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 CTAG1AP78358 180 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ZXDBP98169 803 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 GBE1Q04446 702 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 LMAN2Q12907 356 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ZNF268Q14587 947 aaPredicted RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 CCDC38Q502W7 563 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 CTAGE3PQ8IX95 158 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 PLPP6Q8IY26 295 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 GSDMBQ8TAX9 411 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 C2orf15Q8WU43 125 aaKnown RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 NXPE3Q969Y0 559 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 SCYL1Q96KG9 808 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 KLHL32Q96NJ5 620 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 TRIM62Q9BVG3 475 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ABCG4Q9H172 646 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 HSD3B7Q9H2F3 369 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 ETNK2Q9NVF9 386 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 C2orf42Q9NWW7 574 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 GGA2Q9UJY4 613 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 CORO1CQ9ULV4 474 aaPredicted RBP7.16□□□□□ -1.26
USP1-202ENST00000371146 TMED5Q9Y3A6 229 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 PRKAB1Q9Y478 270 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 IRAK3Q9Y616 596 aa7.16□□□□□ -1.26
USP1-202ENST00000371146 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.15□□□□□ -1.26
USP1-202ENST00000371146 ENO4A6NNW6 628 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 APOL1O14791 398 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 KDM1AO60341 852 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 PIAS1O75925 651 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 VNN2O95498 520 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 RPSAP08865 295 aaKnown RBP7.15□□□□□ -1.26
USP1-202ENST00000371146 OGDHQ02218 1023 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 INCA1Q0VD86 236 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 PTPRRQ15256 657 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 SLC25A52Q3SY17 297 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 AASDHQ4L235 1098 aaPredicted RBP7.15□□□□□ -1.26
USP1-202ENST00000371146 USP39Q53GS9 565 aaKnown RBP7.15□□□□□ -1.26
USP1-202ENST00000371146 SPDYCQ5MJ68 293 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 C6orf118Q5T5N4 469 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 THEMIS2Q5TEJ8 643 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 MARC1Q5VT66 337 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 DET1Q7L5Y6 550 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 PTAR1Q7Z6K3 402 aaPredicted RBP7.15□□□□□ -1.26
USP1-202ENST00000371146 RHOT1Q8IXI2 618 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 PNPLA1Q8N8W4 532 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 CCDC110Q8TBZ0 833 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 RFFLQ8WZ73 363 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 SMIM14Q96QK8 99 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 OSBPL10Q9BXB5 764 aa7.15□□□□□ -1.26
USP1-202ENST00000371146 UBA2Q9UBT2 640 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms