RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PKN3Q6P5Z2 889 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 OSTM1Q86WC4 334 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PYROXD2Q8N2H3 581 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 RAB42Q8N4Z0 105 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 BHMTQ93088 406 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ABTB1Q969K4 478 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF333Q96JL9 665 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PPP1R36Q96LQ0 422 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SGIP1Q9BQI5 828 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MRPL46Q9H2W6 279 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PAPOLBQ9NRJ5 636 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PKD2L2Q9NZM6 624 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 AFF4Q9UHB7 1163 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FBXO5Q9UKT4 447 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 QSER1Q2KHR3 1735 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 COL11A2P13942 1736 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 LOC100653049A0A140TA62 436 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 H3BMM5 538 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MSI1O43347 362 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 KRT34O76011 436 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 OR4Q2P0C623 313 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 IL10P22301 178 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PTPN3P26045 913 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CDK18Q07002 472 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 BCL2L1Q07817 233 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PPIDQ08752 370 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 INPP5AQ14642 412 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PDCD2Q16342 344 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 HABP4Q5JVS0 413 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 KRT80Q6KB66 452 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM45BPQ6NSW5 357 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM9CQ8IZT9 166 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM45AQ8TCE6 357 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TEKT5Q96M29 485 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TMEM175Q9BSA9 504 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC25A51Q9H1U9 297 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 DCLRE1BQ9H816 532 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CATSPERZQ9NTU4 200 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MPP6Q9NZW5 540 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF212Q9UDV6 495 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TMCO1Q9UM00 188 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PLLPQ9Y342 182 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC9A3R1O14745 358 aaPredicted RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 TMEM63AO94886 807 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 FGFR1P11362 822 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SERPINB3P29508 390 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 RAB10P61026 200 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 POLR2LP62875 67 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SMAD3P84022 425 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 BST1Q10588 318 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 LBRQ14739 615 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 PAFAH1B3Q15102 231 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 WASHC2DQ5SRD0 308 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SYPL2Q5VXT5 272 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 NCBP2-AS2Q69YL0 99 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 LRRC8EQ6NSJ5 796 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 KIAA0408Q6ZU52 694 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 PIWIL4Q7Z3Z4 852 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 DENND1CQ8IV53 801 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SCUBE1Q8IWY4 988 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 FIBCD1Q8N539 461 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SMG8Q8ND04 991 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 ICA1LQ8NDH6 482 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 TRIB2Q92519 343 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SNX19Q92543 992 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 C8orf48Q96LL4 319 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 PPP1R10Q96QC0 940 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 BTBD10Q9BSF8 475 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 MYLK2Q9H1R3 596 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SNX15Q9NRS6 342 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 TLR6Q9Y2C9 796 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 H0YGN5 161 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 UNC5CO95185 931 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 FGF19O95750 216 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 IQCF3P0C7M6 154 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 CYBAP13498 195 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 ATP5F1P24539 256 aaPredicted RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 TKTP29401 623 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 SERPINA4P29622 427 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 CCND3P30281 292 aaPredicted RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 VHLP40337 213 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 CPA2P48052 419 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 CXCR3P49682 368 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 KCNK10P57789 538 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 WASHC5Q12768 1159 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 CYLC2Q14093 348 aaPredicted RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 LPIN1Q14693 890 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF284Q2VY69 593 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 TRMT5Q32P41 509 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 AASDHQ4L235 1098 aaPredicted RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 AFTPHQ6ULP2 937 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 MARK2Q7KZI7 788 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 NKAPQ8N5F7 415 aaKnown RBP5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 PIK3R5Q8WYR1 880 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 JADE3Q92613 823 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 ANKRD27Q96NW4 1050 aa5.38□□□□□ -1.55
SMNDC1-202ENST00000369603 MRPL57Q9BQC6 102 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms