RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SERINC3Q13530 473 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 ACAP1Q15027 740 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 KIF19Q2TAC6 998 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 ASTE1Q2TB18 679 aaPredicted RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 HLA-BQ31612 363 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3GQ6DHY5 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3CQ6IPX1 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 ALKBH5Q6P6C2 394 aaKnown RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 LEKR1Q6ZMV7 388 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 PSTKQ8IV42 348 aaKnown RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3Q8IZP1 549 aaPredicted RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 DEFB124Q8NES8 71 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 GRIN3AQ8TCU5 1115 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 ARHGEF26Q96DR7 871 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 HMCESQ96FZ2 354 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 SLC6A18Q96N87 628 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TPX2Q9ULW0 747 aaKnown RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 ANKRD6Q9Y2G4 727 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 SNX11Q9Y5W9 270 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 A0A1W2PR77 199 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 EEF2KO00418 725 aaKnown RBP19.29■□□□□ 0.68
CKS1B-203ENST00000368439 PRPSAP2O60256 369 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 EIF4A3P38919 411 aaKnown RBP19.29■□□□□ 0.68
CKS1B-203ENST00000368439 RECQLP46063 649 aaPredicted RBP19.29■□□□□ 0.68
CKS1B-203ENST00000368439 GEMIN4P57678 1058 aaKnown RBP19.29■□□□□ 0.68
CKS1B-203ENST00000368439 PARP15Q460N3 678 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 IL27RAQ6UWB1 636 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 TRIM69Q86WT6 500 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 HEPHQ9BQS7 1158 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 HDAC8Q9BY41 377 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 TM6SF2Q9BZW4 377 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 GAREM1Q9H706 876 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 HPCAL4Q9UM19 191 aa19.29■□□□□ 0.68
CKS1B-203ENST00000368439 FNDC3AQ9Y2H6 1198 aaKnown RBP19.29■□□□□ 0.68
CKS1B-203ENST00000368439 ZSCAN5CA6NGD5 496 aaPredicted RBP19.28■□□□□ 0.68
CKS1B-203ENST00000368439 VILLO15195 856 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 GSRP00390 522 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 ZNF883P0CG24 379 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 KCNA4P22459 653 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 CTSKP43235 329 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 DNA2P51530 1060 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 TRIM14Q14142 442 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 TEAD4Q15561 434 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 CCDC122Q5T0U0 273 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 AFMIDQ63HM1 303 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 DBX2Q6ZNG2 339 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 RFX8Q6ZV50 586 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 ERN2Q76MJ5 926 aaKnown RBP19.28■□□□□ 0.68
CKS1B-203ENST00000368439 NIPA2Q8N8Q9 360 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 OR8K1Q8NGG5 319 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 BTBD6Q96KE9 485 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 NCAPGQ9BPX3 1015 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 PDFQ9HBH1 243 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 PREBQ9HCU5 417 aa19.28■□□□□ 0.68
CKS1B-203ENST00000368439 BUB1O43683 1085 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 TMCC1O94876 653 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 CER1O95813 267 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 ERCC2P18074 760 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 ITGB7P26010 798 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 PMLP29590 882 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 GKP32189 559 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 HCAR3P49019 387 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 NDST2P52849 883 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
CKS1B-203ENST00000368439 DPYSQ14117 519 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 PIGHQ14442 188 aaPredicted RBP19.27■□□□□ 0.68
CKS1B-203ENST00000368439 INO80DQ53TQ3 878 aaPredicted RBP19.27■□□□□ 0.68
CKS1B-203ENST00000368439 TXNRD3NBQ6F5E7 133 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 ARHGAP12Q8IWW6 846 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 OR2AP1Q8NGE2 309 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 OR6K2Q8NGY2 324 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 CASKIN2Q8WXE0 1202 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 NUP85Q9BW27 656 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 SLC39A8Q9C0K1 460 aa19.27■□□□□ 0.68
CKS1B-203ENST00000368439 CWC15Q9P013 229 aaKnown RBP19.27■□□□□ 0.68
CKS1B-203ENST00000368439 TRPM6Q9BX84 2022 aa19.27■□□□□ 0.67
CKS1B-203ENST00000368439 KCNK3O14649 394 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 SH3BP5O60239 455 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 RNGTTO60942 597 aaKnown RBP19.26■□□□□ 0.67
CKS1B-203ENST00000368439 FAM193AP78312 1265 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 CYTH1Q15438 398 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 DPYSL2Q16555 572 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 SLC18A3Q16572 532 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 ZNF423Q2M1K9 1284 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 MYLK3Q32MK0 819 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 PPP6R3Q5H9R7 873 aaPredicted RBP19.26■□□□□ 0.67
CKS1B-203ENST00000368439 ATXN7L2Q5T6C5 722 aaPredicted RBP19.26■□□□□ 0.67
CKS1B-203ENST00000368439 PARS2Q7L3T8 475 aaKnown RBP19.26■□□□□ 0.67
CKS1B-203ENST00000368439 NPWQ8N729 165 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 NETO2Q8NC67 525 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 PPP1R16AQ96I34 528 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 CELF6Q96J87 481 aaKnown RBP19.26■□□□□ 0.67
CKS1B-203ENST00000368439 LRIG1Q96JA1 1093 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 SERAC1Q96JX3 654 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 CAMK1GQ96NX5 476 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 ZDHHC6Q9H6R6 413 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 TM7SF3Q9NS93 570 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 IP6K2Q9UHH9 426 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 ANAPC7Q9UJX3 599 aa19.26■□□□□ 0.67
CKS1B-203ENST00000368439 SSU72P8A0A1W2PR75 194 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms