RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PDZD7Q9H5P4 517 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 MRPL17Q9NRX2 175 aaKnown RBP11.74□□□□□ -0.53
USF1-201ENST00000368019 MIOSQ9NXC5 875 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 HACD3Q9P035 362 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CIDEBQ9UHD4 219 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CYTH4Q9UIA0 394 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PSMD13Q9UNM6 376 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 HMX2A2RU54 273 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 EIF4E1BA6NMX2 242 aaKnown RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 CXorf49A8MYA2 514 aaPredicted RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 CREB3O43889 395 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 TSPAN1O60635 241 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 RNASEH1O60930 286 aaKnown RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 GSRP00390 522 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 PRKCBP05771 671 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 NPR3P17342 541 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 AXLP30530 894 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 GARSP41250 739 aaKnown RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 TNFSF9P41273 254 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 MAGEA12P43365 314 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 SLC1A6P48664 564 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 HSPA13P48723 471 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 CHN2P52757 468 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 ALDH18A1P54886 795 aaKnown RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 MTTPP55157 894 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 KDSRQ06136 332 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 INCA1Q0VD86 236 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 TDGQ13569 410 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 CCNIQ14094 377 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 KRT81Q14533 505 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 AMHR2Q16671 573 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 CCDC153Q494R4 210 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 KCNT1Q5JUK3 1230 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 CES4AQ5XG92 561 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 CCDC149Q6ZUS6 474 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 NT5DC4Q86YG4 428 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 ZDHHC17Q8IUH5 632 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 ADGRF2Q8IZF7 708 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 PQLC3Q8N755 202 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 FBXO27Q8NI29 283 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 PPP1R14CQ8TAE6 165 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 DLG3Q92796 817 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 FAM193BQ96PV7 902 aaPredicted RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 SERPINI1Q99574 410 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 MECRQ9BV79 373 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 EIF2AQ9BY44 585 aaKnown RBP11.73□□□□□ -0.53
USF1-201ENST00000368019 EBF3Q9H4W6 596 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 PCDH18Q9HCL0 1135 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 PTPRHQ9HD43 1115 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.73□□□□□ -0.53
USF1-201ENST00000368019 PCMTD2Q9NV79 361 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 TNFSF13BQ9Y275 285 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 DNAJC16Q9Y2G8 782 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 IPPQ9Y573 584 aa11.73□□□□□ -0.53
USF1-201ENST00000368019 TRIP11Q15643 1979 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 DMDP11532 3685 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 ARL5CA6NH57 179 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 H0YJX3 145 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 ACKR2O00590 384 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 TEX28O15482 410 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 SIN3BO75182 1162 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 BAG2O95816 211 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 C1RP00736 705 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 PROCP04070 461 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 VCLP18206 1134 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 MX2P20592 715 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 IL4RP24394 825 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 RBL1P28749 1068 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 PDE1BQ01064 536 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 MSLNQ13421 630 aaPredicted RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 HERC3Q15034 1050 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 LRRC23Q53EV4 343 aaPredicted RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 HSP90AA5PQ58FG0 334 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 FAM102AQ5T9C2 384 aaPredicted RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 UGT2A3Q6UWM9 527 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 RAPH1Q70E73 1250 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 ASCL5Q7RTU5 278 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 KBTBD6Q86V97 674 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 LCA5Q86VQ0 697 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 AHI1Q8N157 1196 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 FBXW8Q8N3Y1 598 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 EMC1Q8N766 993 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 GSTCDQ8NEC7 633 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 DDI1Q8WTU0 396 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 RXFP2Q8WXD0 754 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 EZH1Q92800 747 aaPredicted RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms