RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 OR6B1O95007 311 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 THP07101 528 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PSMA4P25789 261 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 EEF1DP29692 281 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 CSE1LP55060 971 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 TEX44Q53QW1 395 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PITRM1Q5JRX3 1037 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 FRA10AC1Q70Z53 315 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 LDB1Q86U70 411 aaPredicted RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 CLVS1Q8IUQ0 354 aaPredicted RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 CLEC4FQ8N1N0 589 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.92□□□□□ -1.3
RTN4-203ENST00000357376 SHCBP1Q8NEM2 672 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 CDC26Q8NHZ8 85 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 LPPQ93052 612 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 SEPHS2Q99611 448 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PIGVQ9NUD9 493 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 UTP6Q9NYH9 597 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 EGFL7Q9UHF1 273 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 FZD10Q9ULW2 581 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 SMIM31A0A1B0GVY4 71 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 YJEFN3A6XGL0 299 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PFDN6O15212 129 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 S100BP04271 92 aaPredicted RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 ZNF23P17027 643 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 BEX3Q00994 111 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 MTX3Q5HYI7 312 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PCID2Q5JVF3 399 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 OTUD3Q5T2D3 398 aaPredicted RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 RPS27LQ71UM5 84 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 TAS2R42Q7RTR8 314 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 GPR141Q7Z602 305 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 TSPAN14Q8NG11 270 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 OR52K2Q8NGK3 314 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 SLC16A10Q8TF71 515 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PCDHAC1Q9H158 963 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 RHOJQ9H4E5 214 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 MID1IP1Q9NPA3 183 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 SLC38A7Q9NVC3 462 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 STK39Q9UEW8 545 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 FBXO5Q9UKT4 447 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PRPF19Q9UMS4 504 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 ANKRD6Q9Y2G4 727 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 DPYSL4O14531 572 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 SPTLC1O15269 473 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 MAP3K13O43283 966 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 RHOBTB1O94844 696 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PIRTP0C851 137 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 CPB1P15086 417 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 IL4RP24394 825 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 MAP4P27816 1152 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 CRABP2P29373 138 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 HADHAP40939 763 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 SLC7A2P52569 658 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 KCNK10P57789 538 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 GHRHRQ02643 423 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 FBXO48Q5FWF7 155 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 CLEC6AQ6EIG7 209 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 GRAMD4Q6IC98 578 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 ESRP1Q6NXG1 681 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 ZFRQ96KR1 1074 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 ZMAT2Q96NC0 199 aaKnown RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 PHF12Q96QT6 1004 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 TSPYL2Q9H2G4 693 aaPredicted RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 MPP6Q9NZW5 540 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 PRG3Q9Y2Y8 225 aaPredicted RBP6.92□□□□□ -1.3
RTN4-203ENST00000357376 PPP2R3BQ9Y5P8 575 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 NRAPQ86VF7 1730 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 COL2A1P02458 1487 aaPredicted RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 TRIM38O00635 465 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 CXCL11O14625 94 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 MSI1O43347 362 aaKnown RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 TIPRLO75663 272 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 LRIG2O94898 1065 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 RBP1P09455 135 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 NFKBIAP25963 317 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 INCA1Q0VD86 236 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 NFYCQ13952 458 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 PDSS2Q86YH6 399 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 DGCR14Q96DF8 476 aaKnown RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 RPRD1AQ96P16 312 aaPredicted RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 COLEC11Q9BWP8 271 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 FTHL17Q9BXU8 183 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 RNF39Q9H2S5 420 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 NOL11Q9H8H0 719 aaKnown RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 VTA1Q9NP79 307 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 RGS18Q9NS28 235 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 SFMBT1Q9UHJ3 866 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 ARFGEF1Q9Y6D6 1849 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 PDHXO00330 501 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 ZBTB14O43829 449 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 NDUFS3O75489 264 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 TMCC1O94876 653 aa6.91□□□□□ -1.3
RTN4-203ENST00000357376 HSPA1AP0DMV8 641 aaKnown RBP6.91□□□□□ -1.3
RTN4-203ENST00000357376 HSPA1BP0DMV9 641 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms