RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CEP44Q9C0F1 390 aa4.06□□□□□ -1.76
CNOT4-202ENST00000356162 EPC1Q9H2F5 836 aa4.06□□□□□ -1.76
CNOT4-202ENST00000356162 NDFIP2Q9NV92 336 aa4.06□□□□□ -1.76
CNOT4-202ENST00000356162 DDX56Q9NY93 547 aaKnown RBP4.06□□□□□ -1.76
CNOT4-202ENST00000356162 BCCIPQ9P287 314 aaKnown RBP eCLIP4.06□□□□□ -1.76
CNOT4-202ENST00000356162 PLA2G4CQ9UP65 541 aa4.06□□□□□ -1.76
CNOT4-202ENST00000356162 RAD54BQ9Y620 910 aa4.06□□□□□ -1.76
CNOT4-202ENST00000356162 BDP1A6H8Y1 2624 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 DAPK3O43293 454 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KDELR3O43731 214 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 BUB1BO60566 1050 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SNAP91O60641 907 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 GSRP00390 522 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KRT1P04264 644 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 EPHX1P07099 455 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SRCP12931 536 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 HLA-EP13747 358 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 GOT1P17174 413 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ERCC2P18074 760 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 CTNNA2P26232 953 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 NOP2P46087 812 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 STK19P49842 368 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 COPAP53621 1224 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ARF5P84085 180 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 CCZ1BP86790 482 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 CCZ1P86791 482 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 NHLH1Q02575 133 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZBTB16Q05516 673 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SLC20A2Q08357 652 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 DPYSL3Q14195 570 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 POLD3Q15054 466 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PPP6R3Q5H9R7 873 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TMCO4Q5TGY1 634 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TXNRD3NBQ6F5E7 133 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ANO7Q6IWH7 933 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KIAA1211LQ6NV74 962 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TSSK4Q6SA08 328 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TMCO3Q6UWJ1 677 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KIAA1324Q6UXG2 1013 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF662Q6ZS27 426 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 CPNE8Q86YQ8 564 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 MAP7D3Q8IWC1 876 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RHOT1Q8IXI2 618 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PCDH20Q8N6Y1 951 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TPCN2Q8NHX9 752 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 FRS2Q8WU20 508 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 HMGB4Q8WW32 186 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ATRIPQ8WXE1 791 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ISG20Q96AZ6 181 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 HMCESQ96FZ2 354 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 MAGEB5Q9BZ81 275 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 NOL6Q9H6R4 1146 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 LRRC19Q9H756 370 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZDHHC4Q9NPG8 344 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PRSS16Q9NQE7 514 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 DNAAF2Q9NVR5 837 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF358Q9NW07 568 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 POLR3BQ9NW08 1133 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 CWC15Q9P013 229 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 USP36Q9P275 1121 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 HPCAL4Q9UM19 191 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SCML1Q9UN30 329 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 MYO18AQ92614 2054 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ATG2BQ96BY7 2078 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZDBF2Q9HCK1 2354 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 A0A0D9SEW6 157 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TTC34A8MYJ7 566 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 C1QTNF3-AMACRE9PGA6 284 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 H0Y858 1186 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RNASEH1O60930 286 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SIN3BO75182 1162 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF217O75362 1048 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RPP40O75818 363 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 IGLV3-19P01714 112 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 COMTP21964 271 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ACVRL1P37023 503 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 P2RY2P41231 377 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 MAP2K3P46734 347 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KIF5AQ12840 1032 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SFSWAPQ12872 951 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SERINC3Q13530 473 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ELAVL3Q14576 367 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RFTN1Q14699 578 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PAFAH1B3Q15102 231 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 TTC31Q49AM3 519 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 USP39Q53GS9 565 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KCNT1Q5JUK3 1230 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 C9orf64Q5T6V5 341 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 HEATR6Q6AI08 1181 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 IL31Q6EBC2 164 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SLC36A4Q6YBV0 504 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 DSG4Q86SJ6 1040 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 LRRC8AQ8IWT6 810 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ARHGAP12Q8IWW6 846 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KATNAL2Q8IYT4 538 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SYCE1Q8N0S2 351 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 NPWQ8N729 165 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 UBE2Q2Q8WVN8 375 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 OR8D1Q8WZ84 308 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PRCCQ92733 491 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms