RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KLF10Q13118 480 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 MAPKAPK3Q16644 382 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SCAIQ8N9R8 606 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 HECW2Q9P2P5 1572 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 PCP4L1A6NKN8 68 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 AGPSO00116 658 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 EPHB6O15197 1021 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 OR6B1O95007 311 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 STAU1O95793 577 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 CLCN5P51795 746 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 PRKCQQ04759 706 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 FSCN1Q16658 493 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 NEPROQ6NW34 567 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SYT12Q8IV01 421 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SENP6Q9GZR1 1112 aaPredicted RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 CRISPLD1Q9H336 500 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 KLRC4O43908 158 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 IDO1P14902 403 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 EPHA3P29320 983 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 GRK3P35626 688 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 PPP3R2Q96LZ3 170 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 CXorf21Q9HAI6 301 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SSU72Q9NP77 194 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC17A7Q9P2U7 560 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 OPTCQ9UBM4 332 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 LNPEPQ9UIQ6 1025 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 PLK4O00444 970 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 TFECO14948 347 aaPredicted RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SIN3BO75182 1162 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC7A2P52569 658 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC6A3Q01959 620 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 TGM3Q08188 693 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 METTL21CQ5VZV1 264 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 HPS6Q86YV9 775 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 GPATCH1Q9BRR8 931 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 MYO3AQ8NEV4 1616 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 PRKG2Q13237 762 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 CCNIQ14094 377 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 UNC5AQ6ZN44 842 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 RASSF6Q6ZTQ3 369 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 DNAAF2Q9NVR5 837 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 COG5Q9UP83 839 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 GAKO14976 1311 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 TCRBV9S1A1TA0A576 114 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAM92AA1XBS5 289 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 LHX1P48742 406 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF484Q5JVG2 852 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PRR23BQ6ZRT6 265 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAM71AQ8IYT1 594 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 OR2T34Q8NGX1 318 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 OR2T3Q8NH03 318 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 HM13Q8TCT9 377 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 TMEM138Q9NPI0 162 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 SEMA4BQ9NPR2 832 aaPredicted RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 BAIAP2Q9UQB8 552 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 A0A087WZ62 844 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 C5orf60A6NFR6 353 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PSMD11O00231 422 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 CABYRO75952 493 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 TKTL1P51854 596 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 SMIM11AP58511 58 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 MTA1Q13330 715 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 AKIRIN2Q53H80 203 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PGAM4Q8N0Y7 254 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 ALG9Q9H6U8 611 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZMYM5Q9UJ78 669 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PLLPQ9Y342 182 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 CYB561D2O14569 222 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 TIPRLO75663 272 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 COX7A2P14406 83 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 FGFR2P21802 821 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 CRHR1P34998 444 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 NEK5Q6P3R8 708 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 GLB1LQ6UWU2 654 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC41A1Q8IVJ1 513 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF614Q8N883 585 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 TAMM41Q96BW9 452 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PTGFRNQ9P2B2 879 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 KCNK1O00180 336 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC25A27O95847 323 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 UTS2BQ765I0 119 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 NKAPQ8N5F7 415 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms