RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ACTL7AQ9Y615 435 aa20.2■□□□□ 0.82
CLTA-202ENST00000345519 TMEM253P0C7T8 217 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 AFF3P51826 1226 aaKnown RBP20.19■□□□□ 0.82
CLTA-202ENST00000345519 CCNHP51946 323 aaPredicted RBP20.19■□□□□ 0.82
CLTA-202ENST00000345519 CNTN1Q12860 1018 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 GRIK2Q13002 908 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 CARD16Q5EG05 197 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 ARHGAP12Q8IWW6 846 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 OR2AP1Q8NGE2 309 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 ZNF564Q8TBZ8 553 aaPredicted RBP20.19■□□□□ 0.82
CLTA-202ENST00000345519 TSC1Q92574 1164 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 ARRDC3Q96B67 414 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 CHP1Q99653 195 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 TNKS2Q9H2K2 1166 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 PREBQ9HCU5 417 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 TM9SF3Q9HD45 589 aa20.19■□□□□ 0.82
CLTA-202ENST00000345519 CWC15Q9P013 229 aaKnown RBP20.19■□□□□ 0.82
CLTA-202ENST00000345519 LEFTY1O75610 366 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 MTA2O94776 668 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 H2AFZP0C0S5 128 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 ITGB7P26010 798 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 NUDT1P36639 197 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 ADKP55263 362 aaKnown RBP20.18■□□□□ 0.82
CLTA-202ENST00000345519 TXNRD3NBQ6F5E7 133 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 H2AFVQ71UI9 128 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 POLNQ7Z5Q5 900 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 MINDY1Q8N5J2 469 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 NPWQ8N729 165 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 TC2NQ8N9U0 490 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 OR14C36Q8NHC7 312 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 MRFAP1L1Q96HT8 127 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 BTBD6Q96KE9 485 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 HEPHQ9BQS7 1158 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 PACSIN1Q9BY11 444 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
CLTA-202ENST00000345519 FSCN3Q9NQT6 498 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 ZNHIT6Q9NWK9 470 aaKnown RBP20.18■□□□□ 0.82
CLTA-202ENST00000345519 RCOR3Q9P2K3 495 aaPredicted RBP20.18■□□□□ 0.82
CLTA-202ENST00000345519 MFHAS1Q9Y4C4 1052 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 ASPMQ8IZT6 3477 aa20.18■□□□□ 0.82
CLTA-202ENST00000345519 DCDC2BA2VCK2 349 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 MYO1FO00160 1098 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 TMCC1O94876 653 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 ZNF883P0CG24 379 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 RARAP10276 462 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 ERCC2P18074 760 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 CSRP1P21291 193 aaKnown RBP20.17■□□□□ 0.82
CLTA-202ENST00000345519 MAN1A1P33908 653 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 RECQLP46063 649 aaPredicted RBP20.17■□□□□ 0.82
CLTA-202ENST00000345519 PPP2CBP62714 309 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 RACK1P63244 317 aaKnown RBP20.17■□□□□ 0.82
CLTA-202ENST00000345519 PPP2CAP67775 309 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 SLC14A1Q13336 389 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 TCEAL1Q15170 157 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 NEK5Q6P3R8 708 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 PIP4P1Q86T03 277 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 LZTR1Q8N653 840 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 GANCQ8TET4 914 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 CTNNBL1Q8WYA6 563 aaPredicted RBP20.17■□□□□ 0.82
CLTA-202ENST00000345519 PPP1R16AQ96I34 528 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 RBSNQ9H1K0 784 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 ZWILCHQ9H900 591 aa20.17■□□□□ 0.82
CLTA-202ENST00000345519 AKR1B15C9JRZ8 316 aaPredicted RBP20.16■□□□□ 0.82
CLTA-202ENST00000345519 PLK4O00444 970 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 PRAMEF11O60813 436 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 PROSCO94903 275 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 FSBPO95073 299 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 FECHP22830 423 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 ARSEP51690 589 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 SNRPD1P62314 119 aaKnown RBP20.16■□□□□ 0.82
CLTA-202ENST00000345519 CCDC15Q0P6D6 951 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 ARSIQ5FYB1 569 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 PPP6R3Q5H9R7 873 aaPredicted RBP20.16■□□□□ 0.82
CLTA-202ENST00000345519 KCNT1Q5JUK3 1230 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.16■□□□□ 0.82
CLTA-202ENST00000345519 ERN2Q76MJ5 926 aaKnown RBP20.16■□□□□ 0.82
CLTA-202ENST00000345519 TRIM5Q9C035 493 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 MIR1-1HGQ9H1L0 117 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLTA-202ENST00000345519 INTUQ9ULD6 942 aa20.16■□□□□ 0.82
CLTA-202ENST00000345519 LRP4O75096 1905 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 VILLO15195 856 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 AP1G1O43747 822 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 LCA5LO95447 670 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 TSR1Q2NL82 804 aaKnown RBP20.15■□□□□ 0.82
CLTA-202ENST00000345519 SMTNL2Q2TAL5 461 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 IL27RAQ6UWB1 636 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 DBX2Q6ZNG2 339 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 GAS2L3Q86XJ1 694 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 GRIN3AQ8TCU5 1115 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 CSPG4P5Q96PW8 444 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 OSBPL1AQ9BXW6 950 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 TM6SF2Q9BZW4 377 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 SLC39A8Q9C0K1 460 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 DEF6Q9H4E7 631 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 PCDH18Q9HCL0 1135 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 LHX3Q9UBR4 397 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 DMTF1Q9Y222 760 aa20.15■□□□□ 0.82
CLTA-202ENST00000345519 A0A1W2PR77 199 aa20.14■□□□□ 0.81
CLTA-202ENST00000345519 ARHGAP42A6NI28 874 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms