RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 LRIG1Q96JA1 1093 aa8.28□□□□□ -1.08
HMGCR-202ENST00000343975 GPR63Q9BZJ6 419 aa8.28□□□□□ -1.08
HMGCR-202ENST00000343975 LRRC40Q9H9A6 602 aa8.28□□□□□ -1.08
HMGCR-202ENST00000343975 MAD1L1Q9Y6D9 718 aa8.28□□□□□ -1.08
HMGCR-202ENST00000343975 STON1Q9Y6Q2 735 aa8.28□□□□□ -1.08
HMGCR-202ENST00000343975 F5H423 210 aaPredicted RBP8.27□□□□□ -1.08
HMGCR-202ENST00000343975 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.08
HMGCR-202ENST00000343975 PCDH8O95206 1070 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 CPP00450 1065 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 PAMP19021 973 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 PLK1P53350 603 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 C5orf22Q49AR2 442 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 ANKRD20A2Q5SQ80 823 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 ANKRD20A1Q5TYW2 823 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 ANKRD20A3Q5VUR7 823 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 SRLQ86TD4 932 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 APCDD1Q8J025 514 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 CCDC110Q8TBZ0 833 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 TNKS2Q9H2K2 1166 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 LRRC19Q9H756 370 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 GLOD4Q9HC38 313 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 EVLQ9UI08 416 aaPredicted RBP8.27□□□□□ -1.08
HMGCR-202ENST00000343975 IKBKGQ9Y6K9 419 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 NCOR1O75376 2440 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 MYO16Q9Y6X6 1858 aa8.27□□□□□ -1.08
HMGCR-202ENST00000343975 MTCL1Q9Y4B5 1905 aaKnown RBP8.27□□□□□ -1.09
HMGCR-202ENST00000343975 NARSO43776 548 aaKnown RBP8.27□□□□□ -1.09
HMGCR-202ENST00000343975 CD72P21854 359 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 PSMD8P48556 350 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 DGKEP52429 567 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 Q6ZVU0 165 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 TTC7BQ86TV6 843 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.27□□□□□ -1.09
HMGCR-202ENST00000343975 NETO2Q8NC67 525 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 CHFRQ96EP1 664 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 SNF8Q96H20 258 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 CCDC77Q9BR77 488 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 CEP41Q9BYV8 373 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 SLC25A51Q9H1U9 297 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 LTB4R2Q9NPC1 389 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 ARIH1Q9Y4X5 557 aaPredicted RBP8.27□□□□□ -1.09
HMGCR-202ENST00000343975 FAM47DPA6NHR8 397 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 GSRP00390 522 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 UGT2B4P06133 528 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 CCR3P51677 355 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 ARL4CP56559 192 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 GUCY2DQ02846 1103 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 ELP6Q0PNE2 266 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 ZNF234Q14588 700 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 IZUMO3Q5VZ72 239 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 DRICH1Q6PGQ1 229 aaPredicted RBP8.27□□□□□ -1.09
HMGCR-202ENST00000343975 KDELC2Q7Z4H8 507 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 NLRP14Q86W24 1093 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 GOLGA6L1Q8N7Z2 621 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 LPCAT1Q8NF37 534 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 FAM71BQ8TC56 605 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 HMGB4Q8WW32 186 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 SKA1Q96BD8 255 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 IER2Q9BTL4 223 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 XAB2Q9HCS7 855 aaKnown RBP8.27□□□□□ -1.09
HMGCR-202ENST00000343975 SMARCAL1Q9NZC9 954 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 HACD3Q9P035 362 aa8.27□□□□□ -1.09
HMGCR-202ENST00000343975 PRR23AA6NEV1 266 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 LRRC72A6NJI9 287 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 J3KR12 359 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 INSIG1O15503 277 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 ADH1BP00325 375 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 NFKB1P19838 968 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CD86P42081 329 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CXCL12P48061 93 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CCNHP51946 323 aaPredicted RBP8.26□□□□□ -1.09
HMGCR-202ENST00000343975 MAXP61244 160 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CDK16Q00536 496 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 SGCGQ13326 291 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 MPP3Q13368 585 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 HNRNPA1L2Q32P51 320 aaKnown RBP8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CENPUQ71F23 418 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CEP68Q76N32 757 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 KBTBD6Q86V97 674 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 JAMLQ86YT9 394 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 RPLP0P6Q8NHW5 317 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 PSKH2Q96QS6 385 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 RBM12Q9NTZ6 932 aaKnown RBP8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CALCOCO1Q9P1Z2 691 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 IL36AQ9UHA7 158 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 COL4A4P53420 1690 aaPredicted RBP8.26□□□□□ -1.09
HMGCR-202ENST00000343975 RNASEH2AO75792 299 aaKnown RBP8.26□□□□□ -1.09
HMGCR-202ENST00000343975 BMP1P13497 986 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 OPRD1P41143 372 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 SGSHP51688 502 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 FAM193AP78312 1265 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 FUT11Q495W5 492 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 FSCBQ5H9T9 825 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CXorf57Q6NSI4 855 aaKnown RBP8.26□□□□□ -1.09
HMGCR-202ENST00000343975 CREG2Q8IUH2 290 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 PALM2Q8IXS6 379 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 SH2D3CQ8N5H7 860 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 SLC25A41Q8N5S1 370 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 ALLCQ8N6M5 410 aa8.26□□□□□ -1.09
HMGCR-202ENST00000343975 PRELID2Q8N945 189 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms