RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 MYLKQ15746 1914 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 ANAPC1Q9H1A4 1944 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 A0A0D9SEW6 157 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 TSPAN3O60637 253 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CLDN11O75508 207 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 KIAA0754O94854 1291 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 HOXD9P28356 352 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 NUMBP49757 651 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 FPGSQ05932 587 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ADGRF1Q5T601 910 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 POTEHQ6S545 545 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CHST9Q7L1S5 443 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 STRA8Q7Z7C7 330 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 NDUFAF2Q8N183 169 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ARRDC2Q8TBH0 407 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ZNF778Q96MU6 729 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ZNF599Q96NL3 588 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 SLC22A12Q96S37 553 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 AGAP2Q99490 1192 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 RBBP8Q99708 897 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 DDX50Q9BQ39 737 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 PITPNM3Q9BZ71 974 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 SLC13A1Q9BZW2 595 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 VPS11Q9H270 941 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ATXN3LQ9H3M9 355 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 MRM3Q9HC36 420 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ATP13A1Q9HD20 1204 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 VPS45Q9NRW7 570 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 IARS2Q9NSE4 1012 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 USP15Q9Y4E8 981 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 OBSL1O75147 1896 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 TTC24A2A3L6 582 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ANKRD65E5RJM6 399 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 TPP1O14773 563 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CXCL14O95715 111 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 RHOCP08134 193 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 F7P08709 466 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 SMAD3P84022 425 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 SEPT6Q14141 434 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ZNF235Q14590 738 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 IHHQ14623 411 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 HERC6Q8IVU3 1022 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CNPY4Q8N129 248 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 PTCD2Q8WV60 388 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 TADA1Q96BN2 335 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 CYP2S1Q96SQ9 504 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
ZNF548-201ENST00000336128 PRKAG2Q9UGJ0 569 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 PLLPQ9Y342 182 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ASB3Q9Y575 518 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 INSL6Q9Y581 213 aa12.62□□□□□ -0.39
ZNF548-201ENST00000336128 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 A0A1B0GVM2 712 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 TCAF2A6NFQ2 919 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 MUSKO15146 869 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 EDF1O60869 148 aaKnown RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ALDOAP04075 364 aaKnown RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 CRHR1P34998 444 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 SERPINB4P48594 390 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 OXCT1P55809 520 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 PDE1BQ01064 536 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ZNF177Q13360 481 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 TXNDC8Q6A555 127 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 YTHDF3Q7Z739 585 aaKnown RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 UBE2Q1Q7Z7E8 422 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 HS6ST3Q8IZP7 471 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ARL14EPQ8N8R7 260 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 SEMA3CQ99985 751 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 SPON2Q9BUD6 331 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ARNT2Q9HBZ2 717 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 SLCO1B3Q9NPD5 702 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 PRKAG3Q9UGI9 489 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 STOML2Q9UJZ1 356 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ILVBLA1L0T0 632 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 KDELR3O43731 214 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 LATS1O95835 1130 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 OLFM2O95897 454 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 LRG1P02750 347 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 GABRR2P28476 465 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 SPRP35270 261 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 LIMK2P53671 638 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 CSE1LP55060 971 aaKnown RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 CYP4F8P98187 520 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 LILRA6Q6PI73 481 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ADAMTS19Q8TE59 1207 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms