RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PITRM1Q5JRX3 1037 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ZNF776Q68DI1 518 aaPredicted RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 RFWD3Q6PCD5 774 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 NXPE4Q6UWF7 544 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 BEND4Q6ZU67 534 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 APTXQ7Z2E3 356 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 SETD3Q86TU7 594 aaPredicted RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 NOP9Q86U38 636 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 XYLT1Q86Y38 959 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 LGI2Q8N0V4 545 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 WFDC5Q8TCV5 224 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 RLN3Q8WXF3 142 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 FAM131CQ96AQ9 280 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 HAPLN3Q96S86 360 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 MKRN2Q9H000 416 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 RSPH9Q9H1X1 276 aaPredicted RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 SYNCQ9H7C4 482 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 FAM204AQ9H8W3 233 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 SGK2Q9HBY8 427 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 TMEM9BQ9NQ34 198 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 PRSS16Q9NQE7 514 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 TAB2Q9NYJ8 693 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 TMEM59LQ9UK28 342 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 FZD4Q9ULV1 537 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ERVW-1Q9UQF0 538 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 MYO18AQ92614 2054 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 A0A1B0GTW7 788 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 GOLGA6L7A0A1B0GV03 622 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 DRGXA6NNA5 263 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 WASH3PC4AMC7 463 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 H0Y626 953 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 M0QYT0 321 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 PES1O00541 588 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 CDX4O14627 284 aaPredicted RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 RNASEH1O60930 286 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 ADRB1P08588 477 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 CEACAM1P13688 526 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 CD70P32970 193 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 NUDT1P36639 197 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 NNMTP40261 264 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 CSKP41240 450 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 WASP42768 502 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 AIF1P55008 147 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 POLR2FP61218 127 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 SHC2P98077 582 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 ECT2LQ008S8 904 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 FMO1Q01740 532 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 GFPT1Q06210 699 aaPredicted RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 NCAPHQ15003 741 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 TRIM61Q5EBN2 209 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 OTUD1Q5VV17 481 aaPredicted RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 RAP1GAP2Q684P5 730 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 IL27RAQ6UWB1 636 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 KIAA1324Q6UXG2 1013 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 STRADAQ7RTN6 431 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 PHF13Q86YI8 300 aaPredicted RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 PASD1Q8IV76 773 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 SLC41A1Q8IVJ1 513 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 ZNF683Q8IZ20 524 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 CCAR2Q8N163 923 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 NEK11Q8NG66 645 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 PIGKQ92643 395 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 IQCDQ96DY2 449 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 ALG14Q96F25 216 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 MRGPRX3Q96LB0 322 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 HSPA12BQ96MM6 686 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 SPAG5Q96R06 1193 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 EDEM3Q9BZQ6 932 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 HSD3B7Q9H2F3 369 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 PDCL3Q9H2J4 239 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 WDCPQ9H6R7 721 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 C12orf49Q9H741 205 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 PPARGC1AQ9UBK2 798 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 INTS6Q9UL03 887 aaKnown RBP6.51□□□□□ -1.37
SMG1-201ENST00000330588 CYP8B1Q9UNU6 501 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 RAD54BQ9Y620 910 aa6.51□□□□□ -1.37
SMG1-201ENST00000330588 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 A0A1W2PQC6 194 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 SLC7A4O43246 635 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 DFNA5O60443 496 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 PAGE1O75459 146 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 MOCS2O96007 188 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 DNTTP04053 509 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 CALB1P05937 261 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 UNGP13051 313 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 HTR7P34969 479 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 RDXP35241 583 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 ETFBP38117 255 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 PTGER3P43115 390 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 RPS14P62263 151 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 PITX1P78337 314 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 KRT83P78385 493 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 IRX4P78413 519 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 DEUP1Q05D60 604 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 ZNF177Q13360 481 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 AUHQ13825 339 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms