RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 EME2A4GXA9 379 aaPredicted RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 NEMP2A6NFY4 417 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 HDAC3O15379 428 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 GRAMD1BQ3KR37 738 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 LIPMQ5VYY2 423 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PKN3Q6P5Z2 889 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 SLC39A8Q9C0K1 460 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 BRD8Q9H0E9 1235 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 AGO3Q9H9G7 860 aaKnown RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 RAD54BQ9Y620 910 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PTCH2Q9Y6C5 1203 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 MATN2O00339 956 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 AURKAO14965 403 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 BUD23O43709 281 aaKnown RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PAGE1O75459 146 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 CELF2O95319 508 aaKnown RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PGK1P00558 417 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 LYNP07948 512 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 ENO3P13929 434 aaPredicted RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 FAM219BQ5XKK7 198 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 ZNF470Q6ECI4 717 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 RPS27LQ71UM5 84 aaKnown RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 CENPLQ8N0S6 344 aaPredicted RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PGAP3Q96FM1 320 aaPredicted RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 TSPAN18Q96SJ8 248 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 CDRT15Q96T59 188 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 NDNQ99608 321 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 CYP4F12Q9HCS2 524 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 FAM95CA0A1B0GW59 222 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 GLTPD2A6NH11 291 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 TMEM114B3SHH9 223 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 DLX3O60479 287 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 ITKQ08881 620 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 SLC12A1Q13621 1099 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 SDHAF4Q5VUM1 108 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 PM20D1Q6GTS8 502 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 ZYG11AQ6WRX3 759 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 LINC00523Q86TU6 105 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 MFSD6LQ8IWD5 586 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 TMEM151AQ8N4L1 468 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 FCRL2Q96LA5 508 aaPredicted RBP17.66■□□□□ 0.42
COL9A1-201ENST00000320755 KIFC1Q9BW19 673 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 C1QTNF1Q9BXJ1 281 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 TRPV6Q9H1D0 765 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 RAP2CQ9Y3L5 183 aa17.66■□□□□ 0.42
COL9A1-201ENST00000320755 DDHD2O94830 711 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 OR4Q2P0C623 313 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 HNRNPLP14866 589 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 TCN1P20061 433 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 AQP4P55087 323 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 INTS6LQ5JSJ4 861 aaKnown RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 PCID2Q5JVF3 399 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 MORN1Q5T089 497 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 ZNF354CQ86Y25 554 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 SCN4BQ8IWT1 228 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 KATNAL1Q9BW62 490 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 SUDS3Q9H7L9 328 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 AAR2Q9Y312 384 aaKnown RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 TTC24A2A3L6 582 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 STX16-NPEPL1H3BU86 382 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 RNASEH1O60930 286 aaKnown RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 ITGB1P05556 798 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 ARSAP15289 507 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 CRABP2P29373 138 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 GRIK1P39086 918 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 COG7P83436 770 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 UPP1Q16831 310 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 METTL23Q86XA0 190 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 OR10T2Q8NGX3 314 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 RCN3Q96D15 328 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 DRC3Q9H069 523 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 GLOD4Q9HC38 313 aa17.65■□□□□ 0.42
COL9A1-201ENST00000320755 DMAP1Q9NPF5 467 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-201ENST00000320755 CCL22O00626 93 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 GRID2O43424 1007 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 CHRNA1P02708 482 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 STMN1P16949 149 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 GLDCP23378 1020 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 CD52P31358 61 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 PLK1P53350 603 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 POLE2P56282 527 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 DLG1Q12959 904 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 IL31Q6EBC2 164 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 GDF6Q6KF10 455 aaPredicted RBP17.64■□□□□ 0.41
COL9A1-201ENST00000320755 LRRC8EQ6NSJ5 796 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 AAGABQ6PD74 315 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 ACAD11Q709F0 780 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 ARHGAP12Q8IWW6 846 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 GTSE1Q9NYZ3 720 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 ODC1P11926 461 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 SLC1A2P43004 574 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 TAS2R39P59534 338 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 MAXP61244 160 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 CSHL1Q14406 222 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 TAF2Q6P1X5 1199 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 TFAP2DQ7Z6R9 452 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 PPHLN1Q8NEY8 458 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms