RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PRDX6P30041 224 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 SDC4P31431 198 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 FLOT2Q14254 428 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 CLLU1OSQ5K130 101 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 GPRIN1Q7Z2K8 1008 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 ZNF781Q8N8C0 355 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 TSEN34Q9BSV6 310 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 TMPRSS4Q9NRS4 437 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 PIH1D1Q9NWS0 290 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 PSAT1Q9Y617 370 aa17.46■□□□□ 0.39
SCAMP4-201ENST00000316097 H3BSA7 217 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 NBNO60934 754 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 HARS2P49590 506 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 GATMP50440 423 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 THOP1P52888 689 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 CDKL1Q00532 357 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 HFE2Q6ZVN8 426 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 PGBD4Q96DM1 585 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 TMLHEQ9NVH6 421 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 HCSTQ9UBK5 93 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 RIMS3Q9UJD0 308 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 C9IYK1 514 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 SETSIPP0DME0 302 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 NPR3P17342 541 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 XRCC1P18887 633 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 COG7P83436 770 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 DCTN2Q13561 401 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 TCTN1Q2MV58 587 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 PPP6R3Q5H9R7 873 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 PPM1LQ5SGD2 360 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 AMIGO2Q86SJ2 522 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 DBF4BQ8NFT6 615 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 MAPK15Q8TD08 544 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 SERPINI1Q99574 410 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 PCDH18Q9HCL0 1135 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 RGS18Q9NS28 235 aa17.45■□□□□ 0.38
SCAMP4-201ENST00000316097 RPLP2P05387 115 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TPSB2P20231 275 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 EMP3P54852 163 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TUSC3Q13454 348 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 APOFQ13790 326 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TPSAB1Q15661 275 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 LRRTM3Q86VH5 581 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 LILRA2Q8N149 483 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 RNF148Q8N7C7 305 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SCLYQ96I15 445 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 OR52B2Q96RD2 323 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CDRT15Q96T59 188 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SMOQ99835 787 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 NR2E3Q9Y5X4 410 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 GOLGA8QA0A0J9YX86 632 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 A0A1B0GTW7 788 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 GOLGA8OA6NCC3 632 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 GOLGA8NF8WBI6 632 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TRMUO75648 421 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 HSPA4LO95757 839 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TYK2P29597 1187 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 RPL9P32969 192 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 EPGNQ6UW88 154 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SLC24A5Q71RS6 500 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SNX32Q86XE0 403 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TNS4Q8IZW8 715 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CATSPER1Q8NEC5 780 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 DDI1Q8WTU0 396 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SNRNP27Q8WVK2 155 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CDKL2Q92772 493 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PPP1R36Q96LQ0 422 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CDH19Q9H159 772 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 AK5Q9Y6K8 562 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 NRP1O14786 923 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 XPO1O14980 1071 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 MAGEB3O15480 346 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CFLARO15519 480 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 OR4Q2P0C623 313 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CPA3P15088 417 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TPP2P29144 1249 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SERPINB8P50452 374 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TKTL1P51854 596 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PKNOX1P55347 436 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 NIPAL4Q0D2K0 466 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PDK1Q15118 436 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PDK2Q15119 407 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 DCAF6Q58WW2 860 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 SYPL2Q5VXT5 272 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 LRRC8DQ7L1W4 858 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TICAM1Q8IUC6 712 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CDKL3Q8IVW4 592 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 DEFB106AQ8N104 65 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 ZMIZ2Q8NF64 920 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 OR10T2Q8NGX3 314 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 ADAM32Q8TC27 787 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 TBCBQ99426 244 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PKP2Q99959 881 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 RNF208Q9H0X6 261 aa17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 PRPF19Q9UMS4 504 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-201ENST00000316097 CDY1Q9Y6F8 540 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms