RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PRSS55Q6UWB4 352 aaPredicted RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 PARM1Q6UWI2 310 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ZDHHC24Q6UX98 284 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 UNC5AQ6ZN44 842 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 INTS8Q75QN2 995 aaKnown RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 DGLUCYQ7Z3D6 616 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 MIER3Q7Z3K6 550 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 CDR2LQ86X02 465 aaPredicted RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 DDX42Q86XP3 938 aaKnown RBP eCLIP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 PALB2Q86YC2 1186 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 C1orf210Q8IVY1 113 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 MYCT1Q8N699 235 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 PJA1Q8NG27 643 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 RDM1Q8NG50 284 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 LMO3Q8TAP4 145 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 GIPC2Q8TF65 315 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 PRPF31Q8WWY3 499 aaKnown RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 SMG7Q92540 1137 aaKnown RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 CD101Q93033 1021 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ART4Q93070 314 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ZBTB9Q96C00 473 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 HVCN1Q96D96 273 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 CPB2Q96IY4 423 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ANKRD27Q96NW4 1050 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 SERPINB12Q96P63 405 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 FIZ1Q96SL8 496 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 TM9SF2Q99805 663 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ZSWIM1Q9BR11 485 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 TMEM175Q9BSA9 504 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 DDX23Q9BUQ8 820 aaKnown RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 GPR88Q9GZN0 384 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 CENPHQ9H3R5 247 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ZHX3Q9H4I2 956 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 LRRC19Q9H756 370 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 TMEM206Q9H813 350 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 XPNPEP1Q9NQW7 623 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ARHGEF3Q9NR81 526 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 SLC2A4RGQ9NR83 387 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 MRPL17Q9NRX2 175 aaKnown RBP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 AGPAT3Q9NRZ7 376 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 GRHL1Q9NZI5 618 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 RGL1Q9NZL6 768 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 SAMD15Q9P1V8 674 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 WHRNQ9P202 907 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 BCCIPQ9P287 314 aaKnown RBP eCLIP5.09□□□□□ -1.59
CKS1B-201ENST00000308987 UVRAGQ9P2Y5 699 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 SLC12A4Q9UP95 1085 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ATP8A1Q9Y2Q0 1164 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 SIT1Q9Y3P8 196 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 IPPQ9Y573 584 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 PCDHA3Q9Y5H8 950 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 ALG6Q9Y672 507 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 NUMBLQ9Y6R0 609 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 CACNA1EQ15878 2313 aa5.09□□□□□ -1.59
CKS1B-201ENST00000308987 OBSL1O75147 1896 aa5.09□□□□□ -1.6
CKS1B-201ENST00000308987 KIAA1549LQ6ZVL6 1849 aa5.09□□□□□ -1.6
CKS1B-201ENST00000308987 SCN1AP35498 2009 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 CNTNAP2Q9UHC6 1331 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 PTPRDP23468 1912 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 O00370 1275 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 NDC80O14777 642 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 GPR42O15529 346 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 B4GALT5O43286 388 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 TSPAN1O60635 241 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 SLITRK3O94933 977 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 LYPLA2O95372 231 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 GLUD1P00367 558 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 CYP1A2P05177 515 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 EDN1P05305 212 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 URODP06132 367 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 C8BP07358 591 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 MMEP08473 750 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 AKAP5P24588 427 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 HOXC13P31276 330 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 GTF2H1P32780 548 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 FLT3P36888 993 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 COILP38432 576 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-201ENST00000308987 MLH1P40692 756 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 SKIV2L2P42285 1042 aaKnown RBP5.08□□□□□ -1.6
CKS1B-201ENST00000308987 OR1G1P47890 313 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 GLUD2P49448 558 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 RAB27AP51159 221 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 STARD6P59095 220 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 MYL7Q01449 175 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 PTP4A2Q12974 167 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 FHL2Q14192 279 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 ZNF268Q14587 947 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-201ENST00000308987 SURF1Q15526 300 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 SMN1Q16637 294 aaKnown RBP5.08□□□□□ -1.6
CKS1B-201ENST00000308987 ANKRD39Q53RE8 183 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 DCAF12L1Q5VU92 463 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 HEATR6Q6AI08 1181 aaKnown RBP5.08□□□□□ -1.6
CKS1B-201ENST00000308987 PPP1R2P3Q6NXS1 205 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 CYB5D1Q6P9G0 228 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 DCLRE1AQ6PJP8 1040 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 CD300LGQ6UXG3 332 aa5.08□□□□□ -1.6
CKS1B-201ENST00000308987 RSPO2Q6UXX9 243 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-201ENST00000308987 CD300LDQ6UXZ3 194 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms