RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ROPN1Q9HAT0 212 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 PNPLA8Q9NP80 782 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CRTAC1Q9NQ79 661 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 MAFFQ9ULX9 164 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 MYH7P12883 1935 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 COL5A3P25940 1745 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CES2O00748 559 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 TGM5O43548 720 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 DYRK3O43781 588 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SUPT7LO94864 414 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 KRT4P19013 534 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 ELK3P41970 407 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CES3Q6UWW8 571 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SLC39A11Q8N1S5 342 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CCDC185Q8N715 623 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 RTL3Q8N8U3 475 aaKnown RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 FBXO25Q8TCJ0 367 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 OVCA2Q8WZ82 227 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 ELMO1Q92556 727 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 MED8Q96G25 268 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 KCTD15Q96SI1 283 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 VPS45Q9NRW7 570 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 NDOR1Q9UHB4 597 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 RUVBL2Q9Y230 463 aaKnown RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CHKBQ9Y259 395 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 L3MBTL1Q9Y468 752 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 AGRPO00253 132 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 LEFTY2O00292 366 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 PTGESO14684 152 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 INPP4BO15327 924 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 ZBTB14O43829 449 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CATP04040 527 aaKnown RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 DHPSP49366 369 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 WNT3AP56704 352 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 JAM2P57087 298 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 STX3Q13277 289 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 RAB33AQ14088 237 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CSHL1Q14406 222 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 DLG2Q15700 870 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 MBLAC2Q68D91 279 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 NEPROQ6NW34 567 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 DET1Q7L5Y6 550 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SLC26A7Q8TE54 656 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SMOQ99835 787 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SMG9Q9H0W8 520 aaKnown RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 PSD3Q9NYI0 1048 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 BTNL10A8MVZ5 291 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 RBP1P09455 135 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 MYBL2P10244 700 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 FMO4P31512 558 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 NDST2P52849 883 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ECT2LQ008S8 904 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 HSPA14Q0VDF9 509 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ANKRD33Q7Z3H0 272 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 OTUB2Q96DC9 234 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 CCDC126Q96EE4 140 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 P2RY11Q96G91 374 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ATP6V1G3Q96LB4 118 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 RIC8BQ9NVN3 520 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SOHLH2Q9NX45 425 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SPASTQ9UBP0 616 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 GULP1Q9UBP9 304 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 CFIP05156 583 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 KCNQ1P51787 676 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 AP1S1P61966 158 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 MOGSQ13724 837 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SYPL2Q5VXT5 272 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SLC26A11Q86WA9 606 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SMARCD2Q92925 531 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 MTBPQ96DY7 904 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 HAPLN3Q96S86 360 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 TUBB6Q9BUF5 446 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 GLOD4Q9HC38 313 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 NOCTQ9UK39 431 aaKnown RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 MAST2Q6P0Q8 1798 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 KPNA5O15131 536 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 CNTFP26441 200 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 GLRBP48167 497 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 AFTPHQ6ULP2 937 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 CMTM8Q8IZV2 173 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 AHI1Q8N157 1196 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 FAR2Q96K12 515 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 TMEM209Q96SK2 561 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 RAI2Q9Y5P3 530 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 GOLGA8TH3BQL2 631 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 PSMD12O00232 456 aaPredicted RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 KIAA0355O15063 1070 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SLC31A1O15431 190 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SLC35G4P0C7Q5 338 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 TYRP14679 529 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ALOX15P16050 662 aaPredicted RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 PECAM1P16284 738 aaPredicted RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 CSKP41240 450 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms