RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 MIPP30301 263 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 STIP1P31948 543 aaKnown RBP8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 RPL22P35268 128 aaKnown RBP8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 MPLP40238 635 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 GPD2P43304 727 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 RAP1GAPP47736 663 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 CACNA2D1P54289 1103 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 MGAT5Q09328 741 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 INCA1Q0VD86 236 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 TAF10Q12962 218 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 PLK5Q496M5 336 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 DENND5BQ6ZUT9 1274 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 CAMKK1Q8N5S9 505 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 ZNF398Q8TD17 642 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 PYROXD1Q8WU10 500 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 RLN3Q8WXF3 142 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 HAUS1Q96CS2 278 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 TRMT2BQ96GJ1 504 aaKnown RBP8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 FUBP3Q96I24 572 aaKnown RBP eCLIP8.01□□□□□ -1.133e-9■■■■□ 19.4
TM4SF1-201ENST00000305366 RMDN2Q96LZ7 410 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 MED10Q9BTT4 135 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 ELOVL4Q9GZR5 314 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 DUSP15Q9H1R2 295 aaPredicted RBP8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 ZWILCHQ9H900 591 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 NOD2Q9HC29 1040 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 CFAP97Q9P2B7 532 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 TJP2Q9UDY2 1190 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 KIAA1257Q9ULG3 409 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 CPQQ9Y646 472 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 USH1CQ9Y6N9 552 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 ANK1P16157 1881 aa8.01□□□□□ -1.13
TM4SF1-201ENST00000305366 TRIP11Q15643 1979 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 ZNF840PA6NDX5 716 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 C4orf47A7E2U8 309 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 K7EQS6 105 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MCF2LO15068 1137 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 TM9SF1O15321 606 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MAP3K13O43283 966 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 SPAG6O75602 509 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 FAM155BO75949 473 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 RHOBTB1O94844 696 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 UNC5CO95185 931 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 EPN2O95208 641 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 RECKO95980 971 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MBL2P11226 248 aaPredicted RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 WARSP23381 471 aaKnown RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 TIE1P35590 1138 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MAGEA11P43364 429 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 ZNF143P52747 638 aaPredicted RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 GDF10P55107 478 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 CDH8P55286 799 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 EIF3EP60228 445 aaKnown RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 KDSRQ06136 332 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MESP2Q0VG99 397 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 ORC1Q13415 861 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 TFDP2Q14188 446 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 NOMO1Q15155 1222 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 STILQ15468 1287 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MAPRE1Q15691 268 aaKnown RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 ST3GAL2Q16842 350 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 SMTNL2Q2TAL5 461 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 FBXO43Q4G163 708 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 ANKRD22Q5VYY1 191 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 SYT13Q7L8C5 426 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 TBC1D1Q86TI0 1168 aaPredicted RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 RFX6Q8HWS3 928 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 ADGRG2Q8IZP9 1017 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 PGBD3Q8N328 593 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 NAT16Q8N8M0 369 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 KCTD6Q8NC69 237 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 LSM14AQ8ND56 463 aaKnown RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 FBF1Q8TES7 1133 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 MZB1Q8WU39 189 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 KLHL29Q96CT2 875 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 TWNKQ96RR1 684 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 KCNK16Q96T55 309 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 WDR83Q9BRX9 315 aaKnown RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 FRMD8Q9BZ67 464 aaPredicted RBP8□□□□□ -1.13
TM4SF1-201ENST00000305366 SMYD3Q9H7B4 428 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 CYLDQ9NQC7 956 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 TXLNGQ9NUQ3 528 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 PHTF1Q9UMS5 762 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 ARHGAP26Q9UNA1 814 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 NME7Q9Y5B8 376 aa8□□□□□ -1.13
TM4SF1-201ENST00000305366 C2CD4BA6NLJ0 364 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 SOBPA7XYQ1 873 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 ZNF487B1APH4 448 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 SPAG7O75391 227 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 DCTN3O75935 186 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 WFS1O76024 890 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 TMEM63AO94886 807 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 KLF8O95600 359 aaPredicted RBP7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 NFATC1O95644 943 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 RBP3P10745 1247 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 IRF1P10914 325 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 EZRP15311 586 aaKnown RBP7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 GPD1P21695 349 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 CA4P22748 312 aa7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 RPA3P35244 121 aaPredicted RBP7.99□□□□□ -1.13
TM4SF1-201ENST00000305366 PEX19P40855 299 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms