RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CCNB1P14635 433 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 MMP13P45452 471 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 EIF3EP60228 445 aaKnown RBP24.87■■□□□ 1.57
HOXC9-201ENST00000303450 CSTF1Q05048 431 aaKnown RBP24.87■■□□□ 1.57
HOXC9-201ENST00000303450 TSSK4Q6SA08 328 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 DPY19L3Q6ZPD9 716 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 TMPRSS6Q8IU80 811 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 TSEN2Q8NCE0 465 aaKnown RBP24.87■■□□□ 1.57
HOXC9-201ENST00000303450 OR2AP1Q8NGE2 309 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 MAML1Q92585 1016 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 GDAP1L1Q96MZ0 367 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 MKRN2Q9H000 416 aaKnown RBP24.87■■□□□ 1.57
HOXC9-201ENST00000303450 LHX3Q9UBR4 397 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 ZNF318Q5VUA4 2279 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 KCNK1O00180 336 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 IGSF6O95976 241 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 TCP1P17987 556 aaKnown RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 COPAP53621 1224 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 PRKD1Q15139 912 aaPredicted RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 LONRF2Q1L5Z9 754 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 ATXN7L2Q5T6C5 722 aaPredicted RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 DSG4Q86SJ6 1040 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 PLPP6Q8IY26 295 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 MAML2Q8IZL2 1156 aaPredicted RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 MAIP1Q8WWC4 291 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 EXOC2Q96KP1 924 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 C16orf45Q96MC5 204 aaPredicted RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 PSKH2Q96QS6 385 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 SEPT10Q9P0V9 454 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 FBXO4Q9UKT5 387 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 ALOX15BO15296 676 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 RBP3P10745 1247 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 GABRG2P18507 467 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 NDUFV2P19404 249 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 CASQ1P31415 396 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 CCNHP51946 323 aaPredicted RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 SLC45A4Q5BKX6 768 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 PAPD7Q5XG87 772 aaKnown RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 NYAP1Q6ZVC0 841 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 TEX26Q8N6G2 289 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 MDGA1Q8NFP4 955 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 COG1Q8WTW3 980 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 MRGPRX1Q96LB2 322 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 QKIQ96PU8 341 aaKnown RBP eCLIP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 FAM129BQ96TA1 746 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 RSPH9Q9H1X1 276 aaPredicted RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 HAUS2Q9NVX0 235 aa24.86■■□□□ 1.57
HOXC9-201ENST00000303450 RBM22Q9NW64 420 aaKnown RBP eCLIP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 R3HDM2Q9Y2K5 976 aaKnown RBP24.86■■□□□ 1.57
HOXC9-201ENST00000303450 CES2O00748 559 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 GALR2O43603 387 aaPredicted RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 JCHAINP01591 159 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 PRLRP16471 622 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 CHRNA3P32297 505 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 HSPA9P38646 679 aaKnown RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 PXNP49023 591 aaPredicted RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 ANGPT1Q15389 498 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 ZNF776Q68DI1 518 aaPredicted RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 HEATR6Q6AI08 1181 aaKnown RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 DARS2Q6PI48 645 aaKnown RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 SYT10Q6XYQ8 523 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 CACUL1Q86Y37 369 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 MMAAQ8IVH4 418 aaKnown RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 CDKL3Q8IVW4 592 aaPredicted RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 RASGEF1CQ8N431 466 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 CHST14Q8NCH0 376 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 OR6K2Q8NGY2 324 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 PRCCQ92733 491 aaPredicted RBP24.85■■□□□ 1.57
HOXC9-201ENST00000303450 SIPA1Q96FS4 1042 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 MS4A14Q96JA4 679 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 FERMT1Q9BQL6 677 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 HEPHQ9BQS7 1158 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 SLC6A17Q9H1V8 727 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 NT5MQ9NPB1 228 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 SAR1BQ9Y6B6 198 aa24.85■■□□□ 1.57
HOXC9-201ENST00000303450 MTSS1O43312 755 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 POP4O95707 220 aaKnown RBP24.84■■□□□ 1.57
HOXC9-201ENST00000303450 IL1BP01584 269 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 HOXA6P31267 233 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 IFI35P80217 286 aaPredicted RBP24.84■■□□□ 1.57
HOXC9-201ENST00000303450 RAD51Q06609 339 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 NSUN2Q08J23 767 aaKnown RBP eCLIP24.84■■□□□ 1.57
HOXC9-201ENST00000303450 MYLK3Q32MK0 819 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 KIAA1324Q6UXG2 1013 aaKnown RBP24.84■■□□□ 1.57
HOXC9-201ENST00000303450 RASSF3Q86WH2 238 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 NAP1L3Q99457 506 aaPredicted RBP24.84■■□□□ 1.57
HOXC9-201ENST00000303450 FRMD8P1Q9BZ68 369 aaPredicted RBP24.84■■□□□ 1.57
HOXC9-201ENST00000303450 EBF1Q9UH73 591 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 IL36AQ9UHA7 158 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 TTLL3Q9Y4R7 772 aa24.84■■□□□ 1.57
HOXC9-201ENST00000303450 KRIT1O00522 736 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 MUSKO15146 869 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 FANCGO15287 622 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 RPS14P62263 151 aaKnown RBP24.83■■□□□ 1.57
HOXC9-201ENST00000303450 GRIN3AQ8TCU5 1115 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 HTR3CQ8WXA8 447 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 ZDHHC6Q9H6R6 413 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 AMACRQ9UHK6 382 aa24.83■■□□□ 1.57
HOXC9-201ENST00000303450 EVLQ9UI08 416 aaPredicted RBP24.83■■□□□ 1.57
HOXC9-201ENST00000303450 TTC7AQ9ULT0 858 aaPredicted RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms