RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 HADHBP55084 474 aaKnown RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SEMG2Q02383 582 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 CREB5Q02930 508 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SLC10A7Q0GE19 358 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SLC10A2Q12908 348 aaPredicted RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PLK5Q496M5 336 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 TTC31Q49AM3 519 aaPredicted RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 ARSIQ5FYB1 569 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 TCEAL6Q6IPX3 200 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZNF783Q6ZMS7 281 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PEX26Q7Z412 305 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 MAP7D3Q8IWC1 876 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 OR8D1Q8WZ84 308 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 TCEAL3Q969E4 200 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 HSPA12BQ96MM6 686 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 LGMNQ99538 433 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 DUSP15Q9H1R2 295 aaPredicted RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PDFQ9HBH1 243 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 TRMT1Q9NXH9 659 aaKnown RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SUN2Q9UH99 717 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PPP2R2CQ9Y2T4 447 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SLCO1B1Q9Y6L6 691 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 TNRC6BQ9UPQ9 1833 aaKnown RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 KCNK1O00180 336 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PSTPIP1O43586 416 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 NRDCO43847 1150 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 GFRA3O60609 400 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PRAMEF11O60813 436 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 RNASEH1O60930 286 aaKnown RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 LMNAP02545 664 aaKnown RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 HTR7P34969 479 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 DRD3P35462 400 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 NDST2P52849 883 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 YBEYP58557 167 aaPredicted RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PDK2Q15119 407 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 TCEAL1Q15170 157 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 KCTD19Q17RG1 926 aaPredicted RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 LAYNQ6UX15 382 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SPOCD1Q6ZMY3 1216 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 NT5DC3Q86UY8 548 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 HDDC3Q8N4P3 179 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 SUMF1Q8NBK3 374 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 CCNYQ8ND76 341 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 PDLIM2Q96JY6 352 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 RNF157Q96PX1 679 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 MYOCQ99972 504 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 OMDQ99983 421 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 KCNH6Q9H252 994 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 EPC1Q9H2F5 836 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 C6orf106Q9H6K1 298 aaPredicted RBP7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 C10orf88Q9H8K7 445 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 FSCN3Q9NQT6 498 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 DTLQ9NZJ0 730 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 NCDNQ9UBB6 729 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 RAB23Q9ULC3 237 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 ITM2BQ9Y287 266 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 WASF2Q9Y6W5 498 aa7.37□□□□□ -1.23
DEPDC1B-201ENST00000265036 NCOR2Q9Y618 2525 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PLXNA2O75051 1894 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 USP27XA6NNY8 438 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PATE3B3GLJ2 98 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 APOL1O14791 398 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 KRT86O43790 486 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 MAFKO60675 156 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CST8O60676 142 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PRKCGP05129 697 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ITPKAP23677 461 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 MAT2AP31153 395 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 HOXA6P31267 233 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CHRNA3P32297 505 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CTNNA1P35221 906 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CDKN2BP42772 138 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 HCAR3P49019 387 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 SPEM2Q0P670 501 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CNTN1Q12860 1018 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZNF235Q14590 738 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ELF2Q15723 593 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 DCAF12L1Q5VU92 463 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 AFMIDQ63HM1 303 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ALYREFQ86V81 257 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 SLC41A1Q8IVJ1 513 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PAF1Q8N7H5 531 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 OR2AP1Q8NGE2 309 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 OR14C36Q8NHC7 312 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 FAM71BQ8TC56 605 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ARRDC3Q96B67 414 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 FAF2Q96CS3 445 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 FAM122AQ96E09 287 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CINPQ9BW66 212 aaPredicted RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 MIR1-1HGQ9H1L0 117 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 NEUROG2Q9H2A3 272 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PABPC3Q9H361 631 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 SEPT10Q9P0V9 454 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 USP36Q9P275 1121 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 RCOR3Q9P2K3 495 aaPredicted RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 LHX3Q9UBR4 397 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 IL36AQ9UHA7 158 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 TP53BP1Q12888 1972 aaPredicted RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CEP295Q9C0D2 2601 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms