RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SHCBP1Q8NEM2 672 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 CMASQ8NFW8 434 aaPredicted RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 DNAJB3Q8WWF6 145 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 VPS33AQ96AX1 596 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 R3HDMLQ9H3Y0 253 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 SIX4Q9UIU6 781 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 DCCP43146 1447 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 TIMM44O43615 452 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 MSCO60682 206 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 FARP2O94887 1054 aaPredicted RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 IL18RAPO95256 599 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 LYPLA2O95372 231 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 POMCP01189 267 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 PRKCGP05129 697 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 CYP4B1P13584 511 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 PSMA4P25789 261 aaKnown RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 PPARGP37231 505 aaPredicted RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 ETV4P43268 484 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 C21orf59P57076 290 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 SPIDRQ14159 915 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 INPP5AQ14642 412 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 LPIN1Q14693 890 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 FBXO47Q5MNV8 452 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 KIAA2013Q8IYS2 634 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 UBR7Q8N806 425 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 REPS2Q8NFH8 660 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 GATA6Q92908 595 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 NTPCRQ9BSD7 190 aaKnown RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 CCDC106Q9BWC9 280 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 STRA6Q9BX79 667 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 EIF2AQ9BY44 585 aaKnown RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 USP29Q9HBJ7 922 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 SLC2A6Q9UGQ3 507 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 CPSF3Q9UKF6 684 aaKnown RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
PALB2-201ENST00000261584 IRS2Q9Y4H2 1338 aa10.24□□□□□ -0.77
PALB2-201ENST00000261584 SPATA31C2B4DYI2 1134 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 SIX3O95343 332 aaPredicted RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 PAMP19021 973 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 FUT4P22083 530 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 PIGFQ07326 219 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 MBLAC2Q68D91 279 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 TMEM214Q6NUQ4 689 aaKnown RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 RDM1Q8NG50 284 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 CANT1Q8WVQ1 401 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 GLMNQ92990 594 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 LPPQ93052 612 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 TNIP3Q96KP6 325 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 C17orf80Q9BSJ5 609 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 SPATC1LQ9H0A9 340 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ARHGEF4Q9NR80 690 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 NDFIP2Q9NV92 336 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 OR12D3Q9UGF7 316 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 DAPK2Q9UIK4 370 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ZMYM5Q9UJ78 669 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 PRG3Q9Y2Y8 225 aaPredicted RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 RAD54BQ9Y620 910 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 SDK1Q7Z5N4 2213 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 KANSL1LA0AUZ9 987 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 SYNDIG1LA6NDD5 238 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 H3BRB1 525 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 HBP1O60381 514 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 BDNFP23560 247 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ECT2LQ008S8 904 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 SLC18A2Q05940 514 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 PTPRCAPQ14761 206 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ARCQ7LC44 396 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 CPNE9Q8IYJ1 553 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 FLAD1Q8NFF5 587 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 MTFMTQ96DP5 389 aaKnown RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 CPNE1Q99829 537 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 TUT1Q9H6E5 874 aaKnown RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 ABI2Q9NYB9 513 aaPredicted RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 A0A1W2PPW3 197 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 E5RI56 91 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 RNASEH2AO75792 299 aaKnown RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 NOVP48745 357 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 CEACAM7Q14002 265 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 TIGD2Q4W5G0 525 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 CES4AQ5XG92 561 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 NIPA1Q7RTP0 329 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 PCYOX1LQ8NBM8 494 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 FCRL3Q96P31 734 aaPredicted RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 LMCD1Q9NZU5 365 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 M0R3G1 203 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ABCD1P33897 745 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ARL2P36404 184 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 BST2Q10589 180 aaKnown RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 GRTP1Q5TC63 336 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 NAPEPLDQ6IQ20 393 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 FRA10AC1Q70Z53 315 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 NRBF2Q96F24 287 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 FBXL20Q96IG2 436 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 ST6GALNAC4Q9H4F1 302 aa10.23□□□□□ -0.77
PALB2-201ENST00000261584 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
PALB2-201ENST00000261584 STRCQ7RTU9 1775 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms