RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PPIDQ08752 370 aaKnown RBP21.06■□□□□ 0.96
RTCA-201ENST00000260563 AP1B1Q10567 949 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 ENPP2Q13822 863 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 GAS6Q14393 721 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 PRKD1Q15139 912 aaPredicted RBP21.06■□□□□ 0.96
RTCA-201ENST00000260563 TIGD7Q6NT04 549 aaPredicted RBP21.06■□□□□ 0.96
RTCA-201ENST00000260563 METTL3Q86U44 580 aaKnown RBP21.06■□□□□ 0.96
RTCA-201ENST00000260563 CCNYQ8ND76 341 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 GABRG3Q99928 467 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 TMEM245Q9H330 911 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 ANKRD36A6QL64 1941 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 WASH3PC4AMC7 463 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 CTIFO43310 598 aaKnown RBP21.05■□□□□ 0.96
RTCA-201ENST00000260563 MAFKO60675 156 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 ADAM23O75077 832 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 MT-CO1P00395 513 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 HLA-EP13747 358 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 HOXB2P14652 356 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 PRKCHP24723 683 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 STIP1P31948 543 aaKnown RBP21.05■□□□□ 0.96
RTCA-201ENST00000260563 SLC7A5Q01650 507 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 PPP1R7Q15435 360 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 ACCSLQ4AC99 568 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 HEATR6Q6AI08 1181 aaKnown RBP21.05■□□□□ 0.96
RTCA-201ENST00000260563 LEKR1Q6ZMV7 388 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 SYDE1Q6ZW31 735 aaPredicted RBP21.05■□□□□ 0.96
RTCA-201ENST00000260563 ZNF366Q8N895 744 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 CASKIN2Q8WXE0 1202 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 C11orf16Q9NQ32 467 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 SLCO3A1Q9UIG8 710 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 ACTL7AQ9Y615 435 aa21.05■□□□□ 0.96
RTCA-201ENST00000260563 TTC34A8MYJ7 566 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 KCNN4O15554 427 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 ATP9BO43861 1147 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 HEXIM1O94992 359 aaKnown RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 CD160O95971 181 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 EPHX1P07099 455 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 VAV1P15498 845 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 GDF10P55107 478 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 MTAPQ13126 283 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 STARD3Q14849 445 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 KCTD19Q17RG1 926 aaPredicted RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 C22orf39Q6P5X5 142 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 SPEM1Q8N4L4 309 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 TMEM105Q8N8V8 129 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 FAM71DQ8N9W8 422 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 NSMCE1Q8WV22 266 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 TRIM51Q9BSJ1 452 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 CEP44Q9C0F1 390 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 USP29Q9HBJ7 922 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 FCF1Q9Y324 198 aaKnown RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 NEU2Q9Y3R4 380 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 ZDBF2Q9HCK1 2354 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 PRR33A8MZF0 331 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 K7ERQ8 282 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 GPR37L1O60883 481 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 ZNF189O75820 626 aaPredicted RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 TMCC1O94876 653 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 KRT14P02533 472 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 ZNF33AQ06730 810 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 PTK6Q13882 451 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 NAA30Q147X3 362 aaPredicted RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 DLG2Q15700 870 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 HNRNPA1L2Q32P51 320 aaKnown RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 INO80DQ53TQ3 878 aaPredicted RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 SYT13Q7L8C5 426 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 CCDC13Q8IYE1 715 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 CCDC89Q8N998 374 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 HTR3CQ8WXA8 447 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 ZNF599Q96NL3 588 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 TSGA13Q96PP4 275 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 FERMT1Q9BQL6 677 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 C1QTNF1Q9BXJ1 281 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 RAB17Q9H0T7 212 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 EPC1Q9H2F5 836 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 ANKZF1Q9H8Y5 726 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 SUN2Q9UH99 717 aa21.04■□□□□ 0.96
RTCA-201ENST00000260563 DMGDHQ9UI17 866 aaKnown RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 UTP11Q9Y3A2 253 aaKnown RBP21.04■□□□□ 0.96
RTCA-201ENST00000260563 EDDM13A0A1B0GTR0 161 aa21.03■□□□□ 0.96
RTCA-201ENST00000260563 TARSL2A2RTX5 802 aaKnown RBP21.03■□□□□ 0.96
RTCA-201ENST00000260563 SMAD6O43541 496 aaKnown RBP21.03■□□□□ 0.96
RTCA-201ENST00000260563 SYNCRIPO60506 623 aaKnown RBP21.03■□□□□ 0.96
RTCA-201ENST00000260563 IFNB1P01574 187 aa21.03■□□□□ 0.96
RTCA-201ENST00000260563 CCNCP24863 283 aa21.03■□□□□ 0.96
RTCA-201ENST00000260563 RFTN1Q14699 578 aaPredicted RBP21.03■□□□□ 0.96
RTCA-201ENST00000260563 TMEM31Q5JXX7 168 aa21.03■□□□□ 0.96
RTCA-201ENST00000260563 TMCO4Q5TGY1 634 aa21.03■□□□□ 0.96
RTCA-201ENST00000260563 RTP4Q96DX8 246 aa21.03■□□□□ 0.96
RTCA-201ENST00000260563 SPATA6Q9NWH7 488 aaPredicted RBP21.03■□□□□ 0.96
RTCA-201ENST00000260563 ETS1P14921 441 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 CCR3P51677 355 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 LBRQ14739 615 aaKnown RBP21.02■□□□□ 0.96
RTCA-201ENST00000260563 TRIP13Q15645 432 aaPredicted RBP21.02■□□□□ 0.96
RTCA-201ENST00000260563 CRY1Q16526 586 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 Q6ZVU0 165 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 PRUNE1Q86TP1 453 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 GPR161Q8N6U8 529 aaKnown RBP21.02■□□□□ 0.96
RTCA-201ENST00000260563 PCDH20Q8N6Y1 951 aaKnown RBP21.02■□□□□ 0.96
RTCA-201ENST00000260563 GLIS1Q8NBF1 620 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms