RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 HTR3CQ8WXA8 447 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 MGME1Q9BQP7 344 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 USP29Q9HBJ7 922 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 ZDHHC4Q9NPG8 344 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 PRSS16Q9NQE7 514 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 DNPEPQ9ULA0 475 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 DRG1Q9Y295 367 aaKnown RBP14.34□□□□□ -0.11
VPS25-201ENST00000253794 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
VPS25-201ENST00000253794 SIN3BO75182 1162 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 ITGAVP06756 1048 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 CES1P23141 567 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 PTPN3P26045 913 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 HOXA6P31267 233 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 MAPK8P45983 427 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 CCR3P51677 355 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 NUBP1P53384 320 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 COPAP53621 1224 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 RHOAP61586 193 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 SNRPD1P62314 119 aaKnown RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 AP1B1Q10567 949 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 ZBTB17Q13105 803 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 TUBB2AQ13885 445 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 BYSLQ13895 437 aaKnown RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 STARD3Q14849 445 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 TEX44Q53QW1 395 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 CARD16Q5EG05 197 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 HEATR6Q6AI08 1181 aaKnown RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 LEKR1Q6ZMV7 388 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 Q6ZVU0 165 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 ZNF572Q7Z3I7 529 aaPredicted RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 CNTD1Q8N815 330 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 TSEN2Q8NCE0 465 aaKnown RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 ATG4AQ8WYN0 398 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 LRIG1Q96JA1 1093 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 FERMT1Q9BQL6 677 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 TUBB2BQ9BVA1 445 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 CINPQ9BW66 212 aaPredicted RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 RSPH9Q9H1X1 276 aaPredicted RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 PRMT8Q9NR22 394 aaPredicted RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 HAUS2Q9NVX0 235 aa14.33□□□□□ -0.12
VPS25-201ENST00000253794 MYO18AQ92614 2054 aaKnown RBP14.33□□□□□ -0.12
VPS25-201ENST00000253794 ESPNB1AK53 854 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 H7C0C1 242 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 KCNK1O00180 336 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 MUSKO15146 869 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 SYNCRIPO60506 623 aaKnown RBP14.32□□□□□ -0.12
VPS25-201ENST00000253794 IGSF6O95976 241 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 COL9A1P20849 921 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 RBL1P28749 1068 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 STIP1P31948 543 aaKnown RBP14.32□□□□□ -0.12
VPS25-201ENST00000253794 WASP42768 502 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 ATP5OP48047 213 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 AP1S1P61966 158 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 ZNF235Q14590 738 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 SLC14A2Q15849 920 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 ACCSLQ4AC99 568 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 KIAA1211LQ6NV74 962 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 RASSF3Q86WH2 238 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 PGBD5Q8N414 524 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 CAMKK1Q8N5S9 505 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 ZNF366Q8N895 744 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 OR2T3Q8NH03 318 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 C1orf54Q8WWF1 131 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 TEKT5Q96M29 485 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 FAM129BQ96TA1 746 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 FAM118BQ9BPY3 351 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 C1QTNF1Q9BXJ1 281 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 CPEB1Q9BZB8 566 aaKnown RBP14.32□□□□□ -0.12
VPS25-201ENST00000253794 POLR1EQ9GZS1 481 aaKnown RBP14.32□□□□□ -0.12
VPS25-201ENST00000253794 POLMQ9NP87 494 aaPredicted RBP14.32□□□□□ -0.12
VPS25-201ENST00000253794 RBM22Q9NW64 420 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS25-201ENST00000253794 C2orf42Q9NWW7 574 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 TRHDEQ9UKU6 1024 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 WASF2Q9Y6W5 498 aa14.32□□□□□ -0.12
VPS25-201ENST00000253794 C5orf60A6NFR6 353 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
VPS25-201ENST00000253794 KRIT1O00522 736 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 POP4O95707 220 aaKnown RBP14.31□□□□□ -0.12
VPS25-201ENST00000253794 JCHAINP01591 159 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 HLA-DQB2P05538 268 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 TDGF1P13385 188 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 AVPR2P30518 371 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 RGRP47804 291 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 CXCL12P48061 93 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 FNTAP49354 379 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 CCNHP51946 323 aaPredicted RBP14.31□□□□□ -0.12
VPS25-201ENST00000253794 ZBTB16Q05516 673 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 GRM3Q14832 879 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 MYLK3Q32MK0 819 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 DARS2Q6PI48 645 aaKnown RBP14.31□□□□□ -0.12
VPS25-201ENST00000253794 DPY19L3Q6ZPD9 716 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 ADAT2Q7Z6V5 191 aaKnown RBP14.31□□□□□ -0.12
VPS25-201ENST00000253794 TMIEQ8NEW7 156 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 KIF18AQ8NI77 898 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 LRRN4Q8WUT4 740 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms