RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 INTUQ9ULD6 942 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 FCF1Q9Y324 198 aaKnown RBP13.01□□□□□ -0.33
VPREB3-201ENST00000248948 ASCC3Q8N3C0 2202 aaKnown RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 ARHGAP42A6NI28 874 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 KPNA3O00505 521 aaPredicted RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 BCAT2O15382 392 aaPredicted RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 DAPK3O43293 454 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 LATO43561 262 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 BUB1O43683 1085 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 MTA2O94776 668 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 TMCC1O94876 653 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 FSBPO95073 299 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 RARAP10276 462 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 TCF4P15884 667 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 ERCC2P18074 760 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 ITGB7P26010 798 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 GRIA4P48058 902 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 AFF3P51826 1226 aaKnown RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 METAP1P53582 386 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 SNRPD1P62314 119 aaKnown RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 CNTN1Q12860 1018 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 HADHQ16836 314 aaKnown RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 KCNT1Q5JUK3 1230 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 PIP5KL1Q5T9C9 394 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 TRIM69Q86WT6 500 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 LZTR1Q8N653 840 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 NPWQ8N729 165 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 CHST14Q8NCH0 376 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 C1orf216Q8TAB5 229 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 FAM71BQ8TC56 605 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 RFFLQ8WZ73 363 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 HSPH1Q92598 858 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 BTBD6Q96KE9 485 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 HEPHQ9BQS7 1158 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 HDAC8Q9BY41 377 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 TM6SF2Q9BZW4 377 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 KLC2Q9H0B6 622 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 MIR1-1HGQ9H1L0 117 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 DYRK4Q9NR20 520 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 CWC15Q9P013 229 aaKnown RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 EIF2B4Q9UI10 523 aaKnown RBP13□□□□□ -0.33
VPREB3-201ENST00000248948 WASF2Q9Y6W5 498 aa13□□□□□ -0.33
VPREB3-201ENST00000248948 A0A1W2PPC4 97 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 CDX4O14627 284 aaPredicted RBP12.99□□□□□ -0.33
VPREB3-201ENST00000248948 PRAMEF11O60813 436 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 LEFTY1O75610 366 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 IGSF6O95976 241 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 MAOBP27338 520 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 SERPINB6P35237 376 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 NEK3P51956 506 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 ATXN3P54252 364 aaPredicted RBP12.99□□□□□ -0.33
VPREB3-201ENST00000248948 GRIK2Q13002 908 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 TCEAL1Q15170 157 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 TEAD4Q15561 434 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 NEK5Q6P3R8 708 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 IL27RAQ6UWB1 636 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 DGLUCYQ7Z3D6 616 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 POLNQ7Z5Q5 900 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 ZSCAN30Q86W11 494 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 ARHGAP12Q8IWW6 846 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 OR14C36Q8NHC7 312 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 TSC1Q92574 1164 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 CSPG4P5Q96PW8 444 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 PANX2Q96RD6 677 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 ANP32EQ9BTT0 268 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 PCDH18Q9HCL0 1135 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 UBA2Q9UBT2 640 aaPredicted RBP12.99□□□□□ -0.33
VPREB3-201ENST00000248948 DOCK9Q9BZ29 2069 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 TRPM6Q9BX84 2022 aa12.99□□□□□ -0.33
VPREB3-201ENST00000248948 CNOT1A5YKK6 2376 aaKnown RBP12.99□□□□□ -0.33
VPREB3-201ENST00000248948 LRRK1Q38SD2 2015 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 FAM47DPA6NHR8 397 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 LCA5LO95447 670 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 KRT7P08729 469 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 FECHP22830 423 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 ARHGAP25P42331 645 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 MAPK8P45983 427 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 RHOAP61586 193 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 RACK1P63244 317 aaKnown RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 FOXK2Q01167 660 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 IL10RBQ08334 325 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 KRT81Q14533 505 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 POM121L1PQ3SYA9 428 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 ERN2Q76MJ5 926 aaKnown RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 GAS2L3Q86XJ1 694 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 MINDY1Q8N5J2 469 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 ARRDC3Q96B67 414 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 CELF6Q96J87 481 aaKnown RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 SLC39A8Q9C0K1 460 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 ZDHHC6Q9H6R6 413 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms