RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PAAF1Q9BRP4 392 aa21.96■■□□□ 1.11
SH2D3A-201ENST00000245908 CHST12Q9NRB3 414 aa21.96■■□□□ 1.11
SH2D3A-201ENST00000245908 ARHGEF38Q9NXL2 777 aa21.96■■□□□ 1.11
SH2D3A-201ENST00000245908 CCDC78A2IDD5 438 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 DFFAO00273 331 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 AHSGP02765 367 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ODC1P11926 461 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 POLD2P49005 469 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 RPL14P50914 215 aaKnown RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ASPHQ12797 758 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 TBC1D25Q3MII6 688 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 SEL1L3Q68CR1 1132 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 RWDD4Q6NW29 188 aaKnown RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 AGMOQ6ZNB7 445 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ARHGAP22Q7Z5H3 698 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 HPS6Q86YV9 775 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 CCDC124Q96CT7 223 aaKnown RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 IL12RB2Q99665 862 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ACBD6Q9BR61 282 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ZDHHC7Q9NXF8 308 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 SSX2IPQ9Y2D8 614 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ANXA9O76027 345 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 DDHD2O94830 711 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 BDNFP23560 247 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 CCDC117Q8IWD4 279 aaPredicted RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 CENPLQ8N0S6 344 aaPredicted RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 ATPAF2Q8N5M1 289 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 KCTD4Q8WVF5 259 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 LENG8Q96PV6 779 aaPredicted RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 TRIM62Q9BVG3 475 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 FAM192AQ9GZU8 254 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 GLOD4Q9HC38 313 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 DMAP1Q9NPF5 467 aaPredicted RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 RUVBL2Q9Y230 463 aaKnown RBP21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 MYLKQ15746 1914 aa21.95■■□□□ 1.1
SH2D3A-201ENST00000245908 PATJQ8NI35 1801 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 TARM1B6A8C7 271 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PIGNO95427 931 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PIK3R1P27986 724 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 HOXC13P31276 330 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PRKAA1Q13131 559 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PPP2R5DQ14738 602 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 DENND5AQ6IQ26 1287 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 FAM43BQ6ZT52 329 aaPredicted RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 SLC41A1Q8IVJ1 513 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 B4GALNT2Q8NHY0 566 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PPP2R3CQ969Q6 453 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 SCYL1Q96KG9 808 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PDLIM1O00151 329 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 MT-CYBP00156 380 aaPredicted RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 THRAP10827 490 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 SAT1P21673 171 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 LSM12Q3MHD2 195 aaKnown RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 ARL13AQ5H913 290 aaPredicted RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 LRRC8EQ6NSJ5 796 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PDSS2Q86YH6 399 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 FSTL5Q8N475 847 aaPredicted RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 MOCOSQ96EN8 888 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 ZNF419Q96HQ0 510 aaPredicted RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 HAPLN3Q96S86 360 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 PKMYT1Q99640 499 aa21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 WDR55Q9H6Y2 383 aaPredicted RBP21.94■■□□□ 1.1
SH2D3A-201ENST00000245908 GOLGA8QA0A0J9YX86 632 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 GOLGA8OA6NCC3 632 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 GOLGA8NF8WBI6 632 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 SLC22A2O15244 555 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 IRAK2O43187 625 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 GRID2O43424 1007 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 HTR7P34969 479 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 AVPR1AP37288 418 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 CCR10P46092 362 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 ARCN1P48444 511 aaKnown RBP21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 BRMS1LQ5PSV4 323 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 TCHHL1Q5QJ38 904 aaPredicted RBP21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 TMC7Q7Z402 723 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 CPSF7Q8N684 471 aaKnown RBP21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 SIK2Q9H0K1 926 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 VCX3BQ9H321 246 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 MRM3Q9HC36 420 aaKnown RBP21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 VTI1BQ9UEU0 232 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 ADAMTS6Q9UKP5 1117 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 PTPRDP23468 1912 aa21.93■■□□□ 1.1
SH2D3A-201ENST00000245908 SLCO1B7G3V0H7 640 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 MAFKO60675 156 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 CYP11A1P05108 521 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 GLRBP48167 497 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 PGGT1BP53609 377 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 GEMP55040 296 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 POU6F1Q14863 301 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 MANEALQ5VSG8 457 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 FOXB2Q5VYV0 432 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 MRPL10Q7Z7H8 261 aaKnown RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 LZTR1Q8N653 840 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 PPHLN1Q8NEY8 458 aaKnown RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 IPMKQ8NFU5 416 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 PTCD2Q8WV60 388 aaKnown RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 FICDQ9BVA6 458 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 ZNF385DQ9H6B1 395 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 TMLHEQ9NVH6 421 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms