RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TEX51A0A1B0GUA7 166 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 UBA6A0AVT1 1052 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ASB14A6NK59 587 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 TGM5O43548 720 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CST8O60676 142 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 KATNA1O75449 491 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 SPAG6O75602 509 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CYP7B1O75881 506 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ENDOD1O94919 500 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ZWINTO95229 277 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 C22orf31O95567 290 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ASGR2P07307 311 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ZSCAN5DPP0CG00 497 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CXCL8P10145 99 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 MARK3P27448 753 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 AOAHP28039 575 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 NF2P35240 595 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CTCFP49711 727 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 GEMIN4P57678 1058 aaKnown RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ELF3P78545 371 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 OTUD4Q01804 1114 aaKnown RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 PDIA2Q13087 525 aaKnown RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 TFDP2Q14188 446 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 KCTD2Q14681 263 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 PDK4Q16654 411 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CYP4A22Q5TCH4 519 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 EFCAB12Q6NXP0 572 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 SCARA5Q6ZMJ2 495 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 GADL1Q6ZQY3 521 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ESPNLQ6ZVH7 1005 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ZBED8Q8IZ13 594 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ARFGAP1Q8N6T3 406 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 LINC01465Q8N7H1 131 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 FBXO15Q8NCQ5 510 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 JOSD2Q8TAC2 188 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CXorf38Q8TB03 319 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ZNF398Q8TD17 642 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 USP6NLQ92738 828 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 LIN37Q96GY3 246 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 TMEM176AQ96HP8 235 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 NLRP4Q96MN2 994 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CPXM1Q96SM3 734 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CNPY3Q9BT09 278 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 TMEM121Q9BTD3 319 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 PITPNM3Q9BZ71 974 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ZDHHC5Q9C0B5 715 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 SYNCQ9H7C4 482 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 VPS37BQ9H9H4 285 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ADARB2Q9NS39 739 aaKnown RBP8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ABCF3Q9NUQ8 709 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 TBK1Q9UHD2 729 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ITGA11Q9UKX5 1188 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 C2CD2Q9Y426 696 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 ZSWIM8A7E2V4 1837 aa8.12□□□□□ -1.11
CXCR4-201ENST00000241393 CFAP69A5D8W1 941 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 ZNF487B1APH4 448 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 GOLGA8SH3BPF8 625 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 DVL2O14641 736 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 MCF2LO15068 1137 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 TYROBPO43914 113 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 FAM155BO75949 473 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 TRUB2O95900 331 aaKnown RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 GH1P01241 217 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 IFNB1P01574 187 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 STAG3L1P0CL83 205 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 SETSIPP0DME0 302 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 ETS1P14921 441 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 NQO1P15559 274 aaKnown RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 IL1R2P27930 398 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 GPD2P43304 727 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 EPHB1P54762 984 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 NCALDP61601 193 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 ROM1Q03395 351 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 PPIL2Q13356 520 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 NOMO1Q15155 1222 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 PREPLQ4J6C6 727 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 CATSPEREQ5SY80 951 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 WLSQ5T9L3 541 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 LCLAT1Q6UWP7 414 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 C4orf22Q6V702 233 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 FASTKD5Q7L8L6 764 aaKnown RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 CCDC91Q7Z6B0 441 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 PRUNE1Q86TP1 453 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 PDIK1LQ8N165 341 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 Q8N3U1 123 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 GDAP1Q8TB36 358 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 PYROXD1Q8WU10 500 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 ASB15Q8WXK1 588 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 CPT1BQ92523 772 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 DIRC2Q96SL1 478 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 ELOVL4Q9GZR5 314 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 SDCBP2Q9H190 292 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 CYTH4Q9UIA0 394 aa8.11□□□□□ -1.11
CXCR4-201ENST00000241393 BARX2Q9UMQ3 279 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.11□□□□□ -1.11
CXCR4-201ENST00000241393 OTOFQ9HC10 1997 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms