RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 PDFQ9HBH1 243 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 SGK2Q9HBY8 427 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 RXFP3Q9NSD7 469 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 DONSONQ9NYP3 566 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 IL36AQ9UHA7 158 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 LCMT1Q9UIC8 334 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 PILRBQ9UKJ0 227 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 DOCK9Q9BZ29 2069 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 CXorf51AA0A1B0GTR3 108 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 ZSCAN5CA6NGD5 496 aaPredicted RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 C1QTNF3-AMACRE9PGA6 284 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 LEFTY1O75610 366 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 FSBPO95073 299 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 KRT7P08729 469 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 COMTP21964 271 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 TCEAL1Q15170 157 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 NCEH1Q6PIU2 408 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 GPR161Q8N6U8 529 aaKnown RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 CADM4Q8NFZ8 388 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 OR14C36Q8NHC7 312 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 FOXJ1Q92949 421 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 ISG20Q96AZ6 181 aaKnown RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 HEPHQ9BQS7 1158 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 MIR1-1HGQ9H1L0 117 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 ZDHHC6Q9H6R6 413 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 HECAQ9UBI9 543 aaPredicted RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.34
LSM5-201ENST00000223084 SALL4Q9UJQ4 1053 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 SLCO1B1Q9Y6L6 691 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 SHROOM3Q8TF72 1996 aa12.9□□□□□ -0.34
LSM5-201ENST00000223084 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.35
LSM5-201ENST00000223084 KRIT1O00522 736 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 INSIG1O15503 277 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 BUB1BO60566 1050 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 GSRP00390 522 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 PRNPP04156 253 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 CFIP05156 583 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 KDELR1P24390 212 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 ADPRHP54922 357 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 RHOAP61586 193 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 IRX4P78413 519 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 MYLK3Q32MK0 819 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 INO80DQ53TQ3 878 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 ANKRD20A8PQ5CZ79 823 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 AGBL4Q5VU57 503 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 PEAR1Q5VY43 1037 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 LZTR1Q8N653 840 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 OR2AP1Q8NGE2 309 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 PCDH19Q8TAB3 1148 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 DNASE2BQ8WZ79 361 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 VOPP1Q96AW1 172 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 LACRTQ9GZZ8 138 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 SP110Q9HB58 689 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 RCOR3Q9P2K3 495 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 LHX3Q9UBR4 397 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 EVLQ9UI08 416 aaPredicted RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 EIF2B4Q9UI10 523 aaKnown RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 IPO11Q9UI26 975 aaKnown RBP12.89□□□□□ -0.35
LSM5-201ENST00000223084 FZD4Q9ULV1 537 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 DUSP10Q9Y6W6 482 aa12.89□□□□□ -0.35
LSM5-201ENST00000223084 A0A0U1RQJ8 604 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 LRRD1A4D1F6 860 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 SPOPO43791 374 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 MFSD11O43934 449 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 MAP3K6O95382 1288 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 IGHV4-34P06331 123 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 SLC1A1P43005 524 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 SNRPD1P62314 119 aaKnown RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 PDK2Q15119 407 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 DUOXA1Q1HG43 343 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 KIAA0895LQ68EN5 471 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 NCBP2-AS2Q69YL0 99 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 PQLC3Q8N755 202 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms