RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 MRGBPQ9NV56 204 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 TRPC5OSA6NMA1 111 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 PHGDHO43175 533 aaKnown RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 NPHS1O60500 1241 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 AP1G2O75843 785 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 BCAS2O75934 225 aaPredicted RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 AHSGP02765 367 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 ME2P23368 584 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 HSPA13P48723 471 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 RAB10P61026 200 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 PM20D1Q6GTS8 502 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 DCLRE1AQ6PJP8 1040 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 FAM35AQ86V20 835 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 CCDC117Q8IWD4 279 aaPredicted RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 SMG8Q8ND04 991 aaKnown RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 KCTD4Q8WVF5 259 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 SMOQ99835 787 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 SGIP1Q9BQI5 828 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 WDR41Q9HAD4 459 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 RIMS3Q9UJD0 308 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 MAGED2Q9UNF1 606 aaPredicted RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 ANKRD33BA6NCL7 494 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 DLX3O60479 287 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 DNAJA2O60884 412 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 LRIG2O94898 1065 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 CAPNS1P04632 268 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 CD1EP15812 388 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 GABRB3P28472 473 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 GJA5P36382 358 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 CCR10P46092 362 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 LHX1P48742 406 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 MRPS22P82650 360 aaKnown RBP13.49□□□□□ -0.25
SRP54-201ENST00000216774 ART3Q13508 389 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 CEACAM7Q14002 265 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 SH2D4BQ5SQS7 431 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 TICAM1Q8IUC6 712 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 TMEM86AQ8N2M4 240 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 ARRDC4Q8NCT1 418 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 PTCD2Q8WV60 388 aaKnown RBP13.49□□□□□ -0.25
SRP54-201ENST00000216774 MAML3Q96JK9 1138 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 CATSPER2Q96P56 530 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 GPR78Q96P69 363 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
SRP54-201ENST00000216774 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
SRP54-201ENST00000216774 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 PTCH2Q9Y6C5 1203 aa13.49□□□□□ -0.25
SRP54-201ENST00000216774 PTGESO14684 152 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 USP17L7P0C7H9 530 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 HSPA1AP0DMV8 641 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 HSPA1BP0DMV9 641 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 STMN1P16949 149 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 SAT1P21673 171 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 GLRBP48167 497 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 INHBEP58166 350 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 LSAMPQ13449 338 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 GPRIN1Q7Z2K8 1008 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 DPP9Q86TI2 863 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 SLC41A1Q8IVJ1 513 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 KDM1BQ8NB78 822 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 DNAJB3Q8WWF6 145 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 MOCOSQ96EN8 888 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 MAELQ96JY0 434 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 PPP1R36Q96LQ0 422 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 PPP1R2P1Q96PQ5 205 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 TBL1YQ9BQ87 522 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 TKTL2Q9H0I9 626 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 MRPL46Q9H2W6 279 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 UTP6Q9NYH9 597 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 PLK2Q9NYY3 685 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 NCKIPSDQ9NZQ3 722 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 UTRNP46939 3433 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 ANXA9O76027 345 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 SMIM18P0DKX4 95 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 CCNCP24863 283 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 PMLP29590 882 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 KPNA2P52292 529 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 DNAJB13P59910 316 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 ADAM17P78536 824 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 TMEM198Q66K66 360 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 BHLHE22Q8NFJ8 381 aaPredicted RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 IRGQQ8WZA9 623 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 PCED1BQ96HM7 432 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 FCRL5Q96RD9 977 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 TINF2Q9BSI4 451 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 MRM3Q9HC36 420 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 PACSIN3Q9UKS6 424 aa13.48□□□□□ -0.25
SRP54-201ENST00000216774 COPG1Q9Y678 874 aaKnown RBP13.48□□□□□ -0.25
SRP54-201ENST00000216774 A0A087X1B8 175 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 FAM95CA0A1B0GW59 222 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 CRTAMO95727 393 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms