RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 RETSATQ6NUM9 610 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 ZNF783Q6ZMS7 281 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 TRIM72Q6ZMU5 477 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 MON1BQ7L1V2 547 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 PARS2Q7L3T8 475 aaKnown RBP22.56■■□□□ 1.2
VTI1B-201ENST00000216456 AOPEPQ8N6M6 819 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 OR13H1Q8NG92 308 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 GBP4Q96PP9 640 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 SELENOOQ9BVL4 669 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 KLC2Q9H0B6 622 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 OSBPL2Q9H1P3 480 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 ZDHHC6Q9H6R6 413 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 DYRK4Q9NR20 520 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 UCKL1Q9NWZ5 548 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 GGT7Q9UJ14 662 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 RAXQ9Y2V3 346 aa22.56■■□□□ 1.2
VTI1B-201ENST00000216456 TCRBV5S1A1TA0A578 114 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 RAD51BO15315 384 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 TEX33O43247 280 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 CCP110O43303 1012 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 GPD1P21695 349 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 ACADVLP49748 655 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 RPL7AP62424 266 aaKnown RBP22.55■■□□□ 1.2
VTI1B-201ENST00000216456 CYP4F3Q08477 520 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 INAVAQ3KP66 663 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 ZNF542PQ5EBM4 170 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 GCNT7Q6ZNI0 430 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 STRADAQ7RTN6 431 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 PHF13Q86YI8 300 aaPredicted RBP22.55■■□□□ 1.2
VTI1B-201ENST00000216456 KLHDC7BQ96G42 594 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 AGPAT1Q99943 283 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 HEPHQ9BQS7 1158 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 HDAC8Q9BY41 377 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 NOL6Q9H6R4 1146 aaKnown RBP22.55■■□□□ 1.2
VTI1B-201ENST00000216456 ERVMER34-1Q9H9K5 563 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 TAS2R14Q9NYV8 317 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 ITM2BQ9Y287 266 aa22.55■■□□□ 1.2
VTI1B-201ENST00000216456 ANKRD11Q6UB99 2663 aaPredicted RBP22.55■■□□□ 1.2
VTI1B-201ENST00000216456 TRIM38O00635 465 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ADRB3P13945 408 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 RHOQP17081 205 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 CDK11BP21127 795 aaKnown RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ABL2P42684 1182 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 OGDHQ02218 1023 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 NRG1Q02297 640 aaPredicted RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 MAPK8IP2Q13387 824 aaPredicted RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ARL13BQ3SXY8 428 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 TMEM259Q4ZIN3 620 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 LRRC73Q5JTD7 316 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ATXN7L2Q5T6C5 722 aaPredicted RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 IQCHQ86VS3 1027 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 SLC22A18ASQ8N1D0 253 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 SLC25A45Q8N413 288 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 RYBPQ8N488 228 aaPredicted RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 PCDH20Q8N6Y1 951 aaKnown RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 BAP1Q92560 729 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 TBC1D31Q96DN5 1066 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 MCEEQ96PE7 176 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ERGIC2Q96RQ1 377 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 CALN1Q9BXU9 219 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 CEP44Q9C0F1 390 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 TMEM248Q9NWD8 314 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 TMEM63CQ9P1W3 806 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 HECAQ9UBI9 543 aaPredicted RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 TPX2Q9ULW0 747 aaKnown RBP22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ITPR1Q14643 2758 aa22.54■■□□□ 1.2
VTI1B-201ENST00000216456 ARID1BQ8NFD5 2236 aaPredicted RBP22.53■■□□□ 1.2
VTI1B-201ENST00000216456 COL5A1P20908 1838 aaPredicted RBP22.53■■□□□ 1.2
VTI1B-201ENST00000216456 LRRC10BA6NIK2 292 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 MYF5P13349 255 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 NEK3P51956 506 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 ACBD5Q5T8D3 534 aaPredicted RBP22.53■■□□□ 1.2
VTI1B-201ENST00000216456 SCYL2Q6P3W7 929 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 C3orf20Q8ND61 904 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 TSC1Q92574 1164 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 LHX6Q9UPM6 363 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 FADS3Q9Y5Q0 445 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 APC2O95996 2303 aa22.53■■□□□ 1.2
VTI1B-201ENST00000216456 POM121BA6NF01 834 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 SIGLEC16A6NMB1 481 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 SPINT1O43278 529 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 RFPL3O75679 317 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 PAK4O96013 591 aaPredicted RBP22.52■■□□□ 1.2
VTI1B-201ENST00000216456 ITIH2P19823 946 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 HNRNPA2B1P22626 353 aaKnown RBP22.52■■□□□ 1.2
VTI1B-201ENST00000216456 ITGB7P26010 798 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 L1CAMP32004 1257 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 MAPKAPK2P49137 400 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 GSCP56915 257 aaPredicted RBP22.52■■□□□ 1.2
VTI1B-201ENST00000216456 TYRO3Q06418 890 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 SLC20A2Q08357 652 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 GALNT15Q8N3T1 639 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 BMFQ96LC9 184 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 GPATCH2LQ9NWQ4 482 aa22.52■■□□□ 1.2
VTI1B-201ENST00000216456 FAM208BQ5VWN6 2430 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 TMCO5BA8MYB1 307 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 YKT6O15498 198 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 FFAR2O15552 330 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 ATMINO43313 823 aaPredicted RBP22.51■■□□□ 1.19
VTI1B-201ENST00000216456 SIGLEC6O43699 453 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms