RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ACTL7AQ9Y615 435 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 TCRBV21S2A2A0A5A6 115 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 SIN3BO75182 1162 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 AVPR2P30518 371 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 PAFAH1B1P43034 410 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 MAPK8P45983 427 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 IFI35P80217 286 aaPredicted RBP20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 SLC10A7Q0GE19 358 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 CARD16Q5EG05 197 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 CAMKK1Q8N5S9 505 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 DTWD2Q8NBA8 298 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 OR2T3Q8NH03 318 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 COG1Q8WTW3 980 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 HTR3CQ8WXA8 447 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 PTPRN2Q92932 1015 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 VAT1Q99536 393 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 TNKS2Q9H2K2 1166 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 PRSS16Q9NQE7 514 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 BCCIPQ9P287 314 aaKnown RBP eCLIP20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 TCRBV7S2A1N4TA0A589 114 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 CFAP69A5D8W1 941 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 KCNK1O00180 336 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 DLL1O00548 723 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 PAPSS2O95340 614 aaPredicted RBP20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 APBB3O95704 486 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 NUBP1P53384 320 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 CYTH1Q15438 398 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 C9orf64Q5T6V5 341 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 C1orf210Q8IVY1 113 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 POLR1EQ9GZS1 481 aaKnown RBP20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 C11orf16Q9NQ32 467 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 RBM22Q9NW64 420 aaKnown RBP eCLIP20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 TTLL3Q9Y4R7 772 aa20.51■□□□□ 0.87
RHBDD3-201ENST00000216085 SHROOM3Q8TF72 1996 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 A0A1W2PQF6 199 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 PEX11BO96011 259 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 NSUN2Q08J23 767 aaKnown RBP eCLIP20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 BYSLQ13895 437 aaKnown RBP20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 GRM3Q14832 879 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 TMEM92Q6UXU6 159 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 TEX26Q8N6G2 289 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 OR2A12Q8NGT7 310 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 ZNF592Q92610 1267 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 MS4A14Q96JA4 679 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 FAM118BQ9BPY3 351 aa20.5■□□□□ 0.87
RHBDD3-201ENST00000216085 BCLAF3A2AJT9 711 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 C1QTNF3-AMACRE9PGA6 284 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 PRNPP04156 253 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 VAV1P15498 845 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 SATB1Q01826 763 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 ITKQ08881 620 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 SFSWAPQ12872 951 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 CCNG2Q16589 344 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 ZNF776Q68DI1 518 aaPredicted RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 KIAA1211LQ6NV74 962 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 TSEN2Q8NCE0 465 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 LRIG1Q96JA1 1093 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 CAPZA3Q96KX2 299 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 HHIPQ96QV1 700 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 NT5MQ9NPB1 228 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 LHX3Q9UBR4 397 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 R3HDM2Q9Y2K5 976 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 CKAP5Q14008 2032 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 ZNF185O15231 689 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 LIASO43766 372 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 POP4O95707 220 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 JCHAINP01591 159 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 COL9A1P20849 921 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 CES1P23141 567 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 CSNK1DP48730 415 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 CCNHP51946 323 aaPredicted RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 RALGPS1Q5JS13 557 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 FAM46CQ5VWP2 391 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 DPY19L3Q6ZPD9 716 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 STK40Q8N2I9 435 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 PGBD3Q8N328 593 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 SLC35B2Q8TB61 432 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 LRRN4Q8WUT4 740 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 PRCCQ92733 491 aaPredicted RBP20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 EXOC2Q96KP1 924 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 IL12RB2Q99665 862 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 MGME1Q9BQP7 344 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 HEPHQ9BQS7 1158 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 MTG2Q9H4K7 406 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 IL36AQ9UHA7 158 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 ZNF148Q9UQR1 794 aa20.49■□□□□ 0.87
RHBDD3-201ENST00000216085 KRIT1O00522 736 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 KCNN4O15554 427 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 ZNF821O75541 412 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 ACADMP11310 421 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 RBL1P28749 1068 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 AP1S1P61966 158 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 TTC31Q49AM3 519 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 ANO7Q6IWH7 933 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 KIF18AQ8NI77 898 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 HMGB4Q8WW32 186 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 C1orf54Q8WWF1 131 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 ATG4AQ8WYN0 398 aa20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 NKD2Q969F2 451 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-201ENST00000216085 PPP1R16AQ96I34 528 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 297.9 ms