RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 C3orf33Q6P1S2 294 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TRAPPC11Q7Z392 1133 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ZC3HC1Q86WB0 502 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 UBE2J2Q8N2K1 259 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 AGR3Q8TD06 166 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 FAM151AQ8WW52 585 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 RTKNQ9BST9 563 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 SEMA3GQ9NS98 782 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TMX2-CTNND1H3BSU7 103 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TNFP01375 233 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 IRGCQ6NXR0 463 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ARL9Q6T311 187 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 USP50Q70EL3 339 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 CCDC36Q8IYA8 594 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 BORCS8Q96FH0 119 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 Q96MT0 163 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 QKIQ96PU8 341 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEB-201ENST00000172853 TMEM27Q9HBJ8 222 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 NGBQ9NPG2 151 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 DDIT4Q9NX09 232 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TMX2Q9Y320 296 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PALLDQ8WX93 1383 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CTBP2P56545 445 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CNSTQ6PJW8 725 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 C1orf186Q6ZWK4 172 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 UNC13DQ70J99 1090 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 LPCAT1Q8NF37 534 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 OR2L3Q8NG85 312 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TRMT10AQ8TBZ6 339 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 ACDQ96AP0 544 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PTERQ96BW5 349 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 EBNA1BP2Q99848 306 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 APOL4Q9BPW4 351 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 SEZ6LQ9BYH1 1024 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TM6SF1Q9BZW5 370 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TRPS1Q9UHF7 1281 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ABCC2Q92887 1545 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 EIF2AK4Q9P2K8 1649 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 DYTNA2CJ06 578 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 IDH3BO43837 385 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TRAPPC6AO75865 159 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 HOXB9P17482 250 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 ADSLP30566 484 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 SERPINB8P50452 374 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ZNF445P59923 1031 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 RPS3AP61247 264 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 ATP6AP1LQ52LC2 224 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TAF2Q6P1X5 1199 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 OR7D4Q8NG98 312 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 MYLPFQ96A32 169 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TIFAQ96CG3 184 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 POLR3AO14802 1390 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 METTL21EPA6NDL7 271 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TSPAN3O60637 253 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 GALK1P51570 392 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 FAM189A2Q15884 450 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RSBN1Q5VWQ0 802 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 AADATQ8N5Z0 425 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ACTRT2Q8TDY3 377 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PRMT8Q9NR22 394 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 PDHXO00330 501 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PDE5AO76074 875 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ATG7O95352 703 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TPBGLP0DKB5 382 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 COL6A1P12109 1028 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 NAA20P61599 178 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PRKCEQ02156 737 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PLOD1Q02809 727 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 MZT2BQ6NZ67 158 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ART5Q96L15 291 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 FAM126AQ9BYI3 521 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 PHF24Q9UPV7 400 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TMEM150CB9EJG8 249 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 GRM6O15303 877 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ZNF823P16415 610 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ILF3Q12906 894 aaKnown RBP eCLIP3.48□□□□□ -1.85
NEB-201ENST00000172853 ILDR2Q71H61 639 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 EIF3MQ7L2H7 374 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 CACUL1Q86Y37 369 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 OR56A4Q8NGH8 313 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ATP8B4Q8TF62 1192 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RAB6BQ9NRW1 208 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ANGPT4Q9Y264 503 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RIMBP3CA6NJZ7 1639 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RIMBP3BA6NNM3 1639 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RIMBP3Q9UFD9 1639 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PNMA8CA0A1B0GUJ8 204 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SLCO1A2P46721 670 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 GALK2Q01415 458 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SLC34A1Q06495 639 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RBMS3Q6XE24 437 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 EIF2AK1Q9BQI3 630 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 A1CFQ9NQ94 594 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 CPED1A4D0V7 1026 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CDH15P55291 814 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 HSF2Q03933 536 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 MINDY4Q4G0A6 757 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 LACTB2Q53H82 288 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 SLFN11Q7Z7L1 901 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 UTP15Q8TED0 518 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms